RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SLC9A3R2Q15599 337 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 ST8SIA2Q92186 375 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 TCTN2Q96GX1 697 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 CA10Q9NS85 328 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SMIM18P0DKX4 95 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 GDPD3Q7L5L3 318 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 DNAJC5GQ8N7S2 189 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 MYBPHLA2RUH7 354 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 LRRC15Q8TF66 581 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 ABHD14BQ96IU4 210 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 M0R2Z0 102 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 ACHEP22303 614 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 FAM3AP98173 230 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 OR4D1Q15615 310 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 OR7E24Q6IFN5 339 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 ZNF547Q8IVP9 402 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SLC38A5Q8WUX1 472 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 NUDT16L1Q9BRJ7 211 aaKnown RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 LPAR3Q9UBY5 353 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 USP3Q9Y6I4 520 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 POM121CA8CG34 1229 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 HLA-DQA1P01909 254 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 HERVK_113P61574 105 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 JSRP1Q96MG2 331 aaPredicted RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 CHRNA10Q9GZZ6 450 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 BEX1Q9HBH7 125 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 CNIH4Q9P003 139 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 CA14Q9ULX7 337 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 COL6A6A6NMZ7 2263 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 MFNGO00587 321 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SMIM17P0DL12 118 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 BMP5P22003 454 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 USF1P22415 310 aaPredicted RBP7.38□□□□□ -1.23
HTT-201ENST00000355072 AFMIDQ63HM1 303 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 OR10A7Q8NGE5 316 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 PXYLP1Q8TE99 480 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 PERPQ96FX8 193 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 DMRT1Q9Y5R6 373 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 ABCA4P78363 2273 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 C7orf72A4D263 438 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 IL13RA2Q14627 380 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 PRAMEF19Q5SWL8 479 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SYPL2Q5VXT5 272 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 OR9Q2Q8NGE9 314 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 FAM198AQ9UFP1 575 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 A0A087WV62 115 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 MAP1LC3B2A6NCE7 125 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 RPS18P62269 152 aaKnown RBP7.38□□□□□ -1.23
HTT-201ENST00000355072 ST6GALNAC5Q9BVH7 336 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 MAP1LC3BQ9GZQ8 125 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SLC23A2Q9UGH3 650 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 TRAPPC6AO75865 159 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 CD52P31358 61 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 TCL1AP56279 114 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 NDUFA6P56556 154 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 CDONQ4KMG0 1287 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 LIPFP07098 398 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 NID1P14543 1247 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 CTXN1P60606 82 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 ENTPD8Q5MY95 495 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 TMEM201Q5SNT2 666 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 DPPA4Q7L190 304 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 OVCH2Q7RTZ1 564 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 CHRM4P08173 479 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 DEFB134Q4QY38 66 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 STUMQ69YW2 141 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 BCL2L2Q92843 193 aaPredicted RBP7.38□□□□□ -1.23
HTT-201ENST00000355072 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 Q9N2K0 584 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 CYSLTR2Q9NS75 346 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 HIF1ANQ9NWT6 349 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 A0A1W2PPK0 400 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 CTDSP2O14595 271 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 OPN1LWP04000 364 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 NHLH2Q02577 135 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 ODF4Q2M2E3 257 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 CLDN19Q8N6F1 224 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 OR2A1Q8NGT9 310 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 ADGRG7Q96K78 797 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 PMCHL2Q9BQD1 86 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 MRPS16Q9Y3D3 137 aaKnown RBP7.38□□□□□ -1.23
HTT-201ENST00000355072 ZNF724A8MTY0 619 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 ACOT8O14734 319 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SLC35E3Q7Z769 313 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 CCDC116Q8IYX3 515 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 PTDSS2Q9BVG9 487 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SSUH2Q9Y2M2 353 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SDC1P18827 310 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SDHAP31040 664 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SP3Q02447 781 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 PLCXD3Q63HM9 321 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 ZNF787Q6DD87 383 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 TMEM229BQ8NBD8 167 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 MMABQ96EY8 250 aaPredicted RBP7.38□□□□□ -1.23
HTT-201ENST00000355072 SGPP1Q9BX95 441 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 BCAS3Q9H6U6 928 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 VDAC3Q9Y277 283 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 TRBV4-1A0A0J9YWV2 114 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SOCS7O14512 581 aa7.38□□□□□ -1.23
HTT-201ENST00000355072 SIAH2O43255 324 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms