RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 SCO1O75880 301 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 GLCEO94923 617 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 CNN1P51911 297 aaKnown RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ATP6V1FQ16864 119 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 PIP5KL1Q5T9C9 394 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ANGPTL5Q86XS5 388 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 OR52I2Q8NH67 350 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 A6NLC8 198 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 TOX3O15405 576 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ACP5P13686 325 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 PLXDC2Q6UX71 529 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 CARFQ8N187 725 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 SLCO4A1Q96BD0 722 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 GPR78Q96P69 363 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 MSX1P28360 303 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 OR2A2Q6IF42 318 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 MRPL52Q86TS9 123 aaKnown RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 CLECL1Q8IZS7 167 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 PHOSPHO2Q8TCD6 241 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 TXNDC17Q9BRA2 123 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 HERPUD2Q9BSE4 406 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 NSG1A0A0A6YYJ2 146 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 MPGP29372 298 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 SOWAHCQ53LP3 525 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 TRILQ7L0X0 811 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 WDR89Q96FK6 387 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 C19orf43Q9BQ61 176 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 SLC2A8Q9NY64 477 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ARAP2Q8WZ64 1704 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 H0Y8G0 127 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 SRP14P37108 136 aaKnown RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 XCR1P46094 333 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 SULT1A1P50225 295 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 WNT7BP56706 349 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 OR2G6Q5TZ20 316 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 LINC00116Q8NCU8 138 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 MAP1LC3CQ9BXW4 147 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 CHST6Q9GZX3 395 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF142P52746 1687 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ENPP1P22413 925 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF600Q6ZNG1 722 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 C15orf39Q6ZRI6 1047 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 SLC16A12Q6ZSM3 486 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 C2orf73Q8N5S3 287 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ST6GAL2Q96JF0 529 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 MOGAT1Q96PD6 335 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 RAB40CQ96S21 281 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 PPP1R3CQ9UQK1 317 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 DUS4LO95620 317 aaKnown RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 USP50Q70EL3 339 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 OR4S1Q8NGB4 309 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ABHD5Q8WTS1 349 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 GPR137Q96N19 417 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 MSRAQ9UJ68 235 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 FKBP1BP68106 108 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 OR1Q1Q15612 314 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 RPS26P11Q5JNZ5 115 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-203ENST00000353578 KLHDC8AQ8IYD2 350 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 ATOH8Q96SQ7 321 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 MBOAT4Q96T53 435 aa11.6□□□□□ -0.55
COL6A3-203ENST00000353578 PGA4P0DJD7 388 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 PGA5P0DJD9 388 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 GLB1P16278 677 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF8P17098 575 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-203ENST00000353578 GJA4P35212 333 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 PRAMEF19Q5SWL8 479 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 OR2AE1Q8NHA4 323 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ARRDC2Q8TBH0 407 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ATF6BQ99941 703 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 LOC102723971A0A1B0GUV8 181 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 BMI1P35226 326 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 RPS27LQ71UM5 84 aaKnown RBP11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF383Q8NA42 475 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 SLC17A9Q9BYT1 436 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 OR10J4P0C629 311 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 RPS21P63220 83 aaKnown RBP11.59□□□□□ -0.55
COL6A3-203ENST00000353578 C9orf152Q5JTZ5 239 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 SLC38A5Q8WUX1 472 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 NECTIN4Q96NY8 510 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 SLC46A2Q9BY10 475 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ZDHHC8Q9ULC8 765 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 GSTZ1O43708 216 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-203ENST00000353578 TCL1AP56279 114 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ERVFC1-1P60608 527 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 KCNJ10P78508 379 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 SLC16A13Q7RTY0 426 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 TMEM217Q8N7C4 229 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 DAOP14920 347 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 LMO2P25791 158 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ADPRHP54922 357 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 CLEC4CQ8WTT0 213 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 PARP11Q9NR21 331 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 MYLKQ15746 1914 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ST8SIA5O15466 376 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 PPP1R11O60927 126 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-203ENST00000353578 GPX5O75715 221 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 IL2RGP31785 369 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ATP5IP56385 69 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-203ENST00000353578 PLP1P60201 277 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 PLCXD3Q63HM9 321 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms