RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 PCK2Q16822 640 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 FAM69BQ5VUD6 431 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 SORCS2Q96PQ0 1159 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 EMC6Q9BV81 110 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 B3GNT2Q9NY97 397 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 TMEM269A0A1B0GVZ9 245 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 DCDC2BA2VCK2 349 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 LIPT2A6NK58 231 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 NOS1APO75052 506 aaPredicted RBP19.47■□□□□ 0.71
SHMT1-202ENST00000352886 ZNF41P51814 821 aaPredicted RBP19.47■□□□□ 0.71
SHMT1-202ENST00000352886 FTMTQ8N4E7 242 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 SPICQ8N5J4 248 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 TTC9Q92623 222 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 HLA-CQ95604 372 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 GAL3ST1Q99999 423 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 CENPMQ9NSP4 180 aa19.47■□□□□ 0.71
SHMT1-202ENST00000352886 MRPS18BQ9Y676 258 aaKnown RBP19.47■□□□□ 0.71
SHMT1-202ENST00000352886 IGHV5-10-1A0A0J9YXX1 117 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 NPIPB13A6NJU9 1138 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 NPIPB4C9JG80 1138 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 EIF1AYO14602 144 aaKnown RBP19.46■□□□□ 0.71
SHMT1-202ENST00000352886 EFNA2O43921 213 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 AQP8O94778 261 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 PNLIPP16233 465 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 DLX5P56178 289 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 NR0B2Q15466 257 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 CPEB2Q7Z5Q1 589 aaKnown RBP19.46■□□□□ 0.71
SHMT1-202ENST00000352886 OR52B4Q8NGK2 314 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 OR5L2Q8NGL0 311 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 DUSP23Q9BVJ7 150 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 DPCDQ9BVM2 203 aaPredicted RBP19.46■□□□□ 0.71
SHMT1-202ENST00000352886 LY6G6EA0A0G2JKS1 128 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 SNRPGP15A8MWD9 76 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 SLC22A5O76082 557 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 ISG15P05161 165 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 VSIG10L2P0DP72 767 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 NAGAP17050 411 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 BIDP55957 195 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 PSMA6P60900 246 aaKnown RBP19.46■□□□□ 0.71
SHMT1-202ENST00000352886 SPOCK1Q08629 439 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 TSSK4Q6SA08 328 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 OR8H3Q8N146 312 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 RNF138Q8WVD3 245 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 CMKLR1Q99788 373 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 CDCP1Q9H5V8 836 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 ALKBH4Q9NXW9 302 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 PIPOXQ9P0Z9 390 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 U3KQA8 63 aa19.46■□□□□ 0.71
SHMT1-202ENST00000352886 PHF3Q92576 2039 aaKnown RBP19.46■□□□□ 0.71
SHMT1-202ENST00000352886 TNRC18O15417 2968 aaPredicted RBP19.46■□□□□ 0.71
SHMT1-202ENST00000352886 CFAP54Q96N23 3096 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 LOC101059948A0A1B0GTJ6 334 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 A0A1W2PQ72 361 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 LMX1BO60663 402 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 AKAIN1P0CW23 69 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 ACHEP22303 614 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 OR3A3P47888 321 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 DHPSP49366 369 aaPredicted RBP19.45■□□□□ 0.7
SHMT1-202ENST00000352886 TSPAN5P62079 268 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 C19orf57Q0VDD7 668 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 CSRP2Q16527 193 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.45■□□□□ 0.7
SHMT1-202ENST00000352886 JAGN1Q8N5M9 183 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 OR10G3Q8NGC4 313 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 OR6M1Q8NGM8 313 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 OR8S1Q8NH09 359 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 CRB3Q9BUF7 120 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 SERINC1Q9NRX5 453 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 MYOTQ9UBF9 498 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 B3GALT5Q9Y2C3 310 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 OR2J2O76002 312 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 CD3DP04234 171 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 H2BFMP0C1H6 154 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 ZNF385CQ66K41 422 aaPredicted RBP19.45■□□□□ 0.7
SHMT1-202ENST00000352886 LCN10Q6JVE6 187 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 OR51S1Q8NGJ8 323 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 SUN5Q8TC36 379 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 DVL3Q92997 716 aaPredicted RBP19.45■□□□□ 0.7
SHMT1-202ENST00000352886 RADILQ96JH8 1075 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 SPSB2Q99619 263 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 POTEKPQ9BYX7 375 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 CLEC4MQ9H2X3 399 aaPredicted RBP19.45■□□□□ 0.7
SHMT1-202ENST00000352886 METTL7AQ9H8H3 244 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 FSCN3Q9NQT6 498 aa19.45■□□□□ 0.7
SHMT1-202ENST00000352886 SIGLEC6O43699 453 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 MPC2O95563 127 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 RLN1P04808 185 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 PTGDSP41222 190 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 EIF1AXP47813 144 aaKnown RBP19.44■□□□□ 0.7
SHMT1-202ENST00000352886 MYBPHQ13203 477 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 TOMM20Q15388 145 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 PLPPR5Q32ZL2 321 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 LYSMD4Q5XG99 296 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 ZNF704Q6ZNC4 412 aaPredicted RBP19.44■□□□□ 0.7
SHMT1-202ENST00000352886 ZNF627Q7L945 461 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 MRGPRX4Q96LA9 322 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 CCDC74BQ96LY2 380 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 APMAPQ9HDC9 416 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 MYEF2Q9P2K5 600 aaKnown RBP19.44■□□□□ 0.7
SHMT1-202ENST00000352886 LOC105371267A0A1B0GV96 52 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms