RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SPARTQ8N0X7 666 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 LILRB4Q8NHJ6 448 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 THEM6Q8WUY1 208 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 CDADC1Q9BWV3 514 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 COQ3Q9NZJ6 369 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 LAMP5Q9UJQ1 280 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 CACNA1CQ13936 2221 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 DAPL1A0PJW8 107 aa16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 ZNF670-ZNF695F2Z2N8 137 aa16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 CCDC92Q53HC0 331 aaPredicted RBP16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 C1orf162Q8NEQ5 155 aaPredicted RBP16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 TSPAN14Q8NG11 270 aa16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 ASB5Q8WWX0 329 aa16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 BOD1Q96IK1 185 aa16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 CDCA4Q9BXL8 241 aa16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 CCNB1IP1Q9NPC3 277 aa16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 PNRC2Q9NPJ4 139 aaKnown RBP16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 SLC17A5Q9NRA2 495 aa16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 EXOSC1Q9Y3B2 195 aaKnown RBP16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 PCDHGB1Q9Y5G3 927 aa16.6■□□□□ 0.25
CHMP4A-201ENST00000347519 PRR14LQ5THK1 2151 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 MAGEA13PA6NCF6 341 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 FARS2O95363 451 aaKnown RBP16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 PTHP01270 115 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 PSMB1P20618 241 aaKnown RBP16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 ASCL1P50553 236 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 ACTC1P68032 377 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 ACTA1P68133 377 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 TGFBR3Q03167 851 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 AQP6Q13520 282 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 SLC25A35Q3KQZ1 300 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 ZNF684Q5T5D7 378 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 OR2G6Q5TZ20 316 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 ZNF454Q8N9F8 522 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 AKR7LQ8NHP1 331 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 ITLN2Q8WWU7 325 aaPredicted RBP16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 ALG8Q9BVK2 526 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 WNT5BQ9H1J7 359 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 ISG20L2Q9H9L3 353 aaKnown RBP16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 B3GNT2Q9NY97 397 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 SLCO1C1Q9NYB5 712 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 SLC5A6Q9Y289 635 aa16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 FLNBO75369 2602 aaKnown RBP16.59■□□□□ 0.25
CHMP4A-201ENST00000347519 TRIM64CA6NLI5 447 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 ATP6V1B1P15313 513 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 PCMT1P22061 227 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 CAPZA2P47755 286 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 PSG4Q00888 419 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 GALEQ14376 348 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 TP53I3Q53FA7 332 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 RNLSQ5VYX0 342 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 ZNF774Q6NX45 483 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 MTFR2Q6P444 385 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 ZNF322Q6U7Q0 402 aaPredicted RBP16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 C22orf34Q6ZV56 151 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 NANOGP1Q8N7R0 232 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 OR2AJ1Q8NGZ0 328 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 OR52N5Q8NH56 324 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 S100PBPQ96BU1 408 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 SLAMF6Q96DU3 332 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 MNTQ99583 582 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 OR2H1Q9GZK4 316 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 C1orf198Q9H425 327 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 INPP5EQ9NRR6 644 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 ELOVL5Q9NYP7 299 aa16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 MRM2Q9UI43 246 aaKnown RBP16.58■□□□□ 0.24
CHMP4A-201ENST00000347519 TMCC2O75069 709 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 AGFG2O95081 481 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 CD79AP11912 226 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 MYL12AP19105 171 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 IL32P24001 234 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 GRNP28799 593 aaKnown RBP16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 OR12D2P58182 307 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 EMX1Q04741 257 aaPredicted RBP16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 LRRN1Q6UXK5 716 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 SYT9Q86SS6 491 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 MDP1Q86V88 176 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 ZNF485Q8NCK3 441 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 RNF133Q8WVZ7 376 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 SPRYD4Q8WW59 207 aaPredicted RBP16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 ZNF75AQ96N20 296 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 OR5M11Q96RB7 305 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 OR8B4Q96RC9 309 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 CENPMQ9NSP4 180 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 LSM2Q9Y333 95 aaKnown RBP16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 TMEM14AQ9Y6G1 99 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 HCFC1P51610 2035 aa16.57■□□□□ 0.24
CHMP4A-201ENST00000347519 A0A087WXM4 84 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 ARPC4-TTLL3A0A0A6YYG9 625 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 OR5H1A6NKK0 313 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 MRPS14O60783 128 aaKnown RBP16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 ABHD16AO95870 558 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 LCKP06239 509 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 RNF224P0DH78 156 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 UGT2B10P36537 528 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 FBXL19-AS1Q494R0 122 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 SLC36A2Q495M3 483 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 CDONQ4KMG0 1287 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 PABPC1L2AQ5JQF8 200 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 OR7E24Q6IFN5 339 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms