RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 RPL3LQ92901 407 aaKnown RBP21.1■□□□□ 0.97
NPAS3-201ENST00000346562 KRBOX1C9JBD0 128 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 GALR2O43603 387 aaPredicted RBP21.1■□□□□ 0.97
NPAS3-201ENST00000346562 NKX2-1P43699 371 aaPredicted RBP21.1■□□□□ 0.97
NPAS3-201ENST00000346562 SLC51BQ86UW2 128 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 THNSL2Q86YJ6 484 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 EMC6Q9BV81 110 aa21.1■□□□□ 0.97
NPAS3-201ENST00000346562 TMEM202A6NGA9 273 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 CPEP16870 476 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 MAGEB1P43366 347 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 PPICP45877 212 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 ETFBKMTQ8IXQ9 262 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 MRPS24Q96EL2 167 aaKnown RBP21.09■□□□□ 0.97
NPAS3-201ENST00000346562 SCPEP1Q9HB40 452 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 QPCTLQ9NXS2 382 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 CCR9P51686 369 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 ELLP55199 621 aaPredicted RBP21.09■□□□□ 0.97
NPAS3-201ENST00000346562 OR2G3Q8NGZ4 309 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 NMES1Q9C002 83 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 UBE2IP63279 158 aaKnown RBP21.09■□□□□ 0.97
NPAS3-201ENST00000346562 BCDIN3DQ7Z5W3 292 aaKnown RBP21.09■□□□□ 0.97
NPAS3-201ENST00000346562 ZDHHC16Q969W1 377 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 MYH13Q9UKX3 1938 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 SOCS7O14512 581 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 ADRA2CP18825 462 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 MVB12AQ96EY5 273 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 KDM3BQ7LBC6 1761 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 SRP9P49458 86 aaKnown RBP21.09■□□□□ 0.97
NPAS3-201ENST00000346562 BPIFB3P59826 476 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 PPP1R3CQ9UQK1 317 aa21.09■□□□□ 0.97
NPAS3-201ENST00000346562 ZFP92A6NM28 416 aa21.08■□□□□ 0.97
NPAS3-201ENST00000346562 ARPC3O15145 178 aa21.08■□□□□ 0.97
NPAS3-201ENST00000346562 PLRG1O43660 514 aaKnown RBP21.08■□□□□ 0.97
NPAS3-201ENST00000346562 APEHP13798 732 aaKnown RBP21.08■□□□□ 0.97
NPAS3-201ENST00000346562 CAMKMTQ7Z624 323 aa21.08■□□□□ 0.97
NPAS3-201ENST00000346562 LSRQ86X29 649 aaPredicted RBP21.08■□□□□ 0.97
NPAS3-201ENST00000346562 OR5M11Q96RB7 305 aa21.08■□□□□ 0.97
NPAS3-201ENST00000346562 ACOXLQ9NUZ1 547 aa21.08■□□□□ 0.97
NPAS3-201ENST00000346562 BHLHE40O14503 412 aa21.08■□□□□ 0.97
NPAS3-201ENST00000346562 ICOSLGO75144 302 aa21.08■□□□□ 0.97
NPAS3-201ENST00000346562 TAGLN2P37802 199 aaKnown RBP21.08■□□□□ 0.97
NPAS3-201ENST00000346562 SDF2Q99470 211 aa21.08■□□□□ 0.97
NPAS3-201ENST00000346562 PHYHD1Q5SRE7 291 aa21.08■□□□□ 0.96
NPAS3-201ENST00000346562 PRR14Q9BWN1 585 aa21.08■□□□□ 0.96
NPAS3-201ENST00000346562 ARRDC1-AS1Q9H2J1 176 aa21.08■□□□□ 0.96
NPAS3-201ENST00000346562 ZMAT3Q9HA38 289 aaKnown RBP21.08■□□□□ 0.96
NPAS3-201ENST00000346562 SEC14L6B5MCN3 397 aa21.08■□□□□ 0.96
NPAS3-201ENST00000346562 HMGA1P17096 107 aaKnown RBP21.08■□□□□ 0.96
NPAS3-201ENST00000346562 LAIR1Q6GTX8 287 aa21.08■□□□□ 0.96
NPAS3-201ENST00000346562 USP51Q70EK9 711 aa21.08■□□□□ 0.96
NPAS3-201ENST00000346562 OR13C8Q8NGS7 320 aa21.08■□□□□ 0.96
NPAS3-201ENST00000346562 REEP6Q96HR9 211 aa21.08■□□□□ 0.96
NPAS3-201ENST00000346562 TAF9BQ9HBM6 251 aa21.08■□□□□ 0.96
NPAS3-201ENST00000346562 LIN7CQ9NUP9 197 aaKnown RBP21.08■□□□□ 0.96
NPAS3-201ENST00000346562 TRABD2BA6NFA1 517 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 BATF2Q8N1L9 274 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 ZNF346Q9UL40 294 aaKnown RBP21.07■□□□□ 0.96
NPAS3-201ENST00000346562 NWD2Q9ULI1 1742 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 MN1Q10571 1320 aaPredicted RBP21.07■□□□□ 0.96
NPAS3-201ENST00000346562 MT-ND4LP03901 98 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 OR10K2Q6IF99 312 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 UBR2Q8IWV8 1755 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 M0R135 149 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 RAF1P04049 648 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 CCR6P51684 374 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 ERHP84090 104 aaKnown RBP21.07■□□□□ 0.96
NPAS3-201ENST00000346562 ZNF799Q96GE5 643 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 TEAD3Q99594 435 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 SOX7Q9BT81 388 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 LAMB4A4D0S4 1761 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 SLC22A20A6NK97 555 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 DUSP8Q13202 625 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 PELI3Q8N2H9 469 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 MRGPRX4Q96LA9 322 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 C20orf27Q9GZN8 174 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 HMGN4O00479 90 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 TNFSF11O14788 317 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 CLDN15P56746 228 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 RPS16P62249 146 aaKnown RBP21.07■□□□□ 0.96
NPAS3-201ENST00000346562 DOC2BQ14184 412 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 NHSL2Q5HYW2 709 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 ANKRD16Q6P6B7 361 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 OLIG3Q7RTU3 272 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 NKAIN4Q8IVV8 208 aa21.07■□□□□ 0.96
NPAS3-201ENST00000346562 NAA50Q9GZZ1 169 aaKnown RBP21.07■□□□□ 0.96
NPAS3-201ENST00000346562 MYH3P11055 1940 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 NRASP01111 189 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 S100A11P31949 105 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 CLN3Q13286 438 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 ISL2Q96A47 359 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 UGT2A1Q9Y4X1 527 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 MEIKINA0A087WXM9 373 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 ZNF195O14628 629 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 PIPP12273 146 aaPredicted RBP21.06■□□□□ 0.96
NPAS3-201ENST00000346562 ZNF718Q3SXZ3 478 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 HIST2H3AQ71DI3 136 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 FAM58AQ8N1B3 248 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 NANOGP1Q8N7R0 232 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 SLC38A9Q8NBW4 561 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 SLCO4A1Q96BD0 722 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms