RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 ZNF749O43361 778 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 CTAG2O75638 210 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 RAD51DO75771 328 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 ARL6IP1Q15041 203 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 NKAIN2Q5VXU1 208 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 RAET1LQ5VY80 246 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 ANKRD16Q6P6B7 361 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 MRGPREQ86SM8 312 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 FGF14Q92915 247 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 CDCA3Q99618 268 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-201ENST00000345512 KCNK15Q9H427 330 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 PARPBPQ9NWS1 579 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 CHRNA9Q9UGM1 479 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 MRM2Q9UI43 246 aaKnown RBP14.08□□□□□ -0.16
PTPRU-201ENST00000345512 SHOXO15266 292 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 CPN1P15169 458 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 TMEM81Q6P7N7 255 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 OTOSQ8NHW6 89 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 KCNG3Q8TAE7 436 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 PGLYRP3Q96LB9 341 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 C4orf45Q96LM5 186 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 ABHD6Q9BV23 337 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 SLC5A7Q9GZV3 580 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 BANF2Q9H503 90 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 CD207Q9UJ71 328 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 WDPCPO95876 746 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 TBX6O95947 436 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-201ENST00000345512 SNRNP70P08621 437 aaKnown RBP14.07□□□□□ -0.16
PTPRU-201ENST00000345512 PPT1P50897 306 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 ZNF84P51523 738 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 SLC25A1P53007 311 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 PEA15Q15121 130 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 KIAA0895LQ68EN5 471 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 LAMTOR1Q6IAA8 161 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 FBXO46Q6PJ61 603 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-201ENST00000345512 CBLN3Q6UW01 205 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 GLIPR1L1Q6UWM5 242 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 OR8B4Q96RC9 309 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 TCEAL2Q9H3H9 227 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-201ENST00000345512 PTP4A3O75365 173 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 AVPR2P30518 371 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 PPP1CAP62136 330 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 TMEM52Q8NDY8 209 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 TMEM231Q9H6L2 316 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 ZNF223Q9UK11 482 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-201ENST00000345512 DKKL1Q9UK85 242 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 SCN2AQ99250 2005 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 IGHG1P01857 330 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 TMIGD3P0DMS9 266 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-201ENST00000345512 SERPINF1P36955 418 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 FAM122BQ7Z309 247 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 GRINAQ7Z429 371 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 C10orf90Q96M02 699 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 ZNF442Q9H7R0 627 aa14.07□□□□□ -0.16
PTPRU-201ENST00000345512 PI3P19957 117 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 PSMB6P28072 239 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 GNRHRP30968 328 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 SNU13P55769 128 aaKnown RBP14.06□□□□□ -0.16
PTPRU-201ENST00000345512 SGCBQ16585 318 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 RAB11FIP2Q7L804 512 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 OR11G2Q8NGC1 345 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 OR56B1Q8NGI3 324 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 FRRS1LQ9P0K9 344 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 ZNF629Q9UEG4 869 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-201ENST00000345512 OPN4Q9UHM6 478 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 MTRF1O75570 445 aaKnown RBP14.06□□□□□ -0.16
PTPRU-201ENST00000345512 BLVRBP30043 206 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-201ENST00000345512 MDGA2Q7Z553 956 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 OR10AC1Q8NH08 325 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 MS4A7Q9GZW8 240 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-201ENST00000345512 ZMIZ1Q9ULJ6 1067 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 HS3ST3A1Q9Y663 406 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 K7EPK0 472 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 SULT2B1O00204 365 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 IMPA2O14732 288 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 EIF4E2O60573 245 aaKnown RBP14.06□□□□□ -0.16
PTPRU-201ENST00000345512 GABRA1P14867 456 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 S100A2P29034 98 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 HRH1P35367 487 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 FAM71E2Q8N5Q1 922 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 SULT4A1Q9BR01 284 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 RPP25Q9BUL9 199 aaKnown RBP14.06□□□□□ -0.16
PTPRU-201ENST00000345512 PBDC1Q9BVG4 233 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 LAT2Q9GZY6 243 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 PLEK2Q9NYT0 353 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 CABIN1Q9Y6J0 2220 aa14.06□□□□□ -0.16
PTPRU-201ENST00000345512 HRKO00198 91 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 TRAPPC6AO75865 159 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 CAV2P51636 162 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 NANOS3P60323 173 aaKnown RBP14.05□□□□□ -0.16
PTPRU-201ENST00000345512 HTRA4P83105 476 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-201ENST00000345512 RHEBQ15382 184 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 BPHLQ86WA6 291 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-201ENST00000345512 NAXDQ8IW45 347 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 SLC22A8Q8TCC7 542 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 TAAR8Q969N4 342 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 MMACHCQ9Y4U1 282 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 TRAV8-7A0A075B6U6 113 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 SULT1C2O00338 296 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 HSPA12AO43301 675 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms