RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 TMEM54Q969K7 222 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TEAD3Q99594 435 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 ULBP2Q9BZM5 246 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 PAK1IP1Q9NWT1 392 aaPredicted RBP12.04□□□□□ -0.48
TPM4-202ENST00000344824 GLTPQ9NZD2 209 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 BLOC1S6Q9UL45 172 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.04□□□□□ -0.486e-14■□□□□ 10.6
TPM4-202ENST00000344824 B9D1Q9UPM9 204 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 COA3Q9Y2R0 106 aaPredicted RBP12.04□□□□□ -0.48
TPM4-202ENST00000344824 AMDHD2Q9Y303 409 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TPRKBQ9Y3C4 175 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 RPL36Q9Y3U8 105 aaKnown RBP12.04□□□□□ -0.48
TPM4-202ENST00000344824 SLC25A15Q9Y619 301 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 SLC22A31A6NKX4 558 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 KHDRBS3O75525 346 aaKnown RBP12.03□□□□□ -0.48
TPM4-202ENST00000344824 GLCEO94923 617 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 WNT11O96014 354 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 LYNP07948 512 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 CCDC159P0C7I6 412 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 CRABP1P29762 137 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 ATP6V1E1P36543 226 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 NAA10P41227 235 aaPredicted RBP12.03□□□□□ -0.48
TPM4-202ENST00000344824 CAPZA2P47755 286 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 MTNR1AP48039 350 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 CXCR4P61073 352 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 UBE2NP61088 152 aaKnown RBP12.03□□□□□ -0.48
TPM4-202ENST00000344824 CEACAM16Q2WEN9 425 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 THEM4Q5T1C6 240 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 SLC22A25Q6T423 547 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 LINGO2Q7L985 606 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 C20orf196Q8IYI0 205 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 STX19Q8N4C7 294 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 ZNF511Q8NB15 262 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 SMAP2Q8WU79 429 aaPredicted RBP12.03□□□□□ -0.48
TPM4-202ENST00000344824 HTRA1Q92743 480 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 PIGTQ969N2 578 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 MCHR2Q969V1 340 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 MBD6Q96DN6 1003 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 TMEM204Q9BSN7 226 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 CCDC90BQ9GZT6 254 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 BEX4Q9NWD9 120 aaPredicted RBP12.03□□□□□ -0.48
TPM4-202ENST00000344824 ERVK-18Q9QC07 812 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 WARS2Q9UGM6 360 aaKnown RBP12.03□□□□□ -0.48
TPM4-202ENST00000344824 PSORS1C1Q9UIG5 152 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 LAMP3Q9UQV4 416 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 FKBP7Q9Y680 259 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 ACANP16112 2415 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 IGLV1-36A0A0B4J1U3 117 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 AHCYL1O43865 530 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 SELENOFO60613 162 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 CSNK2BP67870 215 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 SLC35D3Q5M8T2 416 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 LRFN4Q6PJG9 635 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 SLC25A47Q6Q0C1 308 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 SPNS3Q6ZMD2 512 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 SSX8Q7RTT4 187 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 ZBTB46Q86UZ6 589 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 ERI1Q8IV48 349 aaKnown RBP12.03□□□□□ -0.48
TPM4-202ENST00000344824 WDR31Q8NA23 367 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 OR4F15Q8NGB8 312 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 LGALS12Q96DT0 336 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 RADILQ96JH8 1075 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 COPS4Q9BT78 406 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 YTHDF1Q9BYJ9 559 aaKnown RBP12.03□□□□□ -0.48
TPM4-202ENST00000344824 LINC00470Q9BZP3 86 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 SEC61A2Q9H9S3 476 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 CRLF2Q9HC73 371 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 GPR35Q9HC97 309 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 B3GAT2Q9NPZ5 323 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 PLCXD1Q9NUJ7 323 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 MOKQ9UQ07 419 aa12.03□□□□□ -0.48
TPM4-202ENST00000344824 EFCAB10A6NFE3 127 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 CENPBD1B2RD01 187 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 MPZL1O95297 269 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 NR2C1P13056 603 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 PTAFRP25105 342 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 CDAP32320 146 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 NKX6-1P78426 367 aaPredicted RBP12.02□□□□□ -0.49
TPM4-202ENST00000344824 ARF1P84077 181 aaKnown RBP12.02□□□□□ -0.49
TPM4-202ENST00000344824 MVKQ03426 396 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 ST3GAL4Q11206 333 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 HIST3H3Q16695 136 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 MEP1BQ16820 701 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 ZNF672Q499Z4 452 aaPredicted RBP12.02□□□□□ -0.49
TPM4-202ENST00000344824 KCTD21Q4G0X4 260 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 Q5PR19 223 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 LINC01590Q5TEZ4 76 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 ZNF611Q8N823 705 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 OR52I1Q8NGK6 324 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 FNDC8Q8TC99 324 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 NMD3Q96D46 503 aaKnown RBP12.02□□□□□ -0.49
TPM4-202ENST00000344824 ZNF837Q96EG3 531 aaPredicted RBP12.02□□□□□ -0.49
TPM4-202ENST00000344824 CNN2Q99439 309 aaKnown RBP12.02□□□□□ -0.49
TPM4-202ENST00000344824 TBX5Q99593 518 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 KCNS3Q9BQ31 491 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 RACGAP1Q9H0H5 632 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 CXXC4Q9H2H0 198 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 ZNF696Q9H7X3 374 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 COMMD3-BMI1R4GMX3 469 aa12.02□□□□□ -0.49
TPM4-202ENST00000344824 MAGEA13PA6NCF6 341 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms