RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 FGF20Q9NP95 211 aaPredicted RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 DEC1Q9P2X7 70 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 PITPNC1Q9UKF7 332 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 TRBV23OR9-2A0A075B6M9 112 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 SPCS3P61009 180 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 LRRTM3Q86VH5 581 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 TCTEX1D1Q8N7M0 179 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 ZNF207O43670 478 aaKnown RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 ATP1B3P54709 279 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 PHLDA2Q53GA4 152 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 TMEM37Q8WXS4 190 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 CMBLQ96DG6 245 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 FAM71F1Q96KD3 344 aaPredicted RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 OR10A5Q9H207 317 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 OR10A2Q9H208 303 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 B4GALT6Q9UBX8 382 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 PCDHGA1Q9Y5H4 931 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 IGF2P01344 180 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 RNLSQ5VYX0 342 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 TSTD1Q8NFU3 115 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 TSSK2Q96PF2 358 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 ANTXRLA6NF34 631 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 DTD2Q96FN9 168 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 ELOVL2Q9NXB9 296 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 LILRB3O75022 631 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 AOAHP28039 575 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 KLHDC8AQ8IYD2 350 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 LGI3Q8N145 548 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 PLPP7Q8NBV4 271 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 ZNF320A2RRD8 509 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 OR3A1P47881 315 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 ZNF385CQ66K41 422 aaPredicted RBP12.52□□□□□ -0.4
TRIO-202ENST00000344204 PRR27Q6MZM9 219 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 VRK2Q86Y07 508 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 TGIF2LXQ8IUE1 241 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 LURAP1LQ8IV03 231 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 ZNF845Q96IR2 970 aaPredicted RBP12.52□□□□□ -0.4
TRIO-202ENST00000344204 WDR76Q9H967 626 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 OR5V1Q9UGF6 321 aa12.52□□□□□ -0.4
TRIO-202ENST00000344204 FTCDNL1E5RQL4 147 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 PRAMEF8Q5VWM4 474 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 PRAMEF7Q5VXH5 474 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 COL14A1Q05707 1796 aaKnown RBP12.52□□□□□ -0.41
TRIO-202ENST00000344204 CST4P01036 141 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 GPNMBQ14956 572 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 WBP2NLQ6ICG8 309 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 PTOV1Q86YD1 416 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 FIBINQ8TAL6 211 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 CLN5O75503 358 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 NRSN1Q8IZ57 195 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 RNF175Q8N4F7 328 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 TMPRSS13Q9BYE2 586 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 CXXC1Q9P0U4 656 aaPredicted RBP12.52□□□□□ -0.41
TRIO-202ENST00000344204 NRAPQ86VF7 1730 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 DDAH2O95865 285 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 ALOX5APP20292 161 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 PPIAP62937 165 aaKnown RBP12.52□□□□□ -0.41
TRIO-202ENST00000344204 NTMQ9P121 344 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 EDDM13A0A1B0GTR0 161 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 CLDN1O95832 211 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 HMGN2P05204 90 aaKnown RBP12.52□□□□□ -0.41
TRIO-202ENST00000344204 ADRA2CP18825 462 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 SPINT3P49223 89 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 CRYGNQ8WXF5 182 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 ASB11Q8WXH4 323 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 TMEM269A0A1B0GVZ9 245 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 NNATQ16517 81 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 ARL14EPQ8N8R7 260 aaPredicted RBP12.52□□□□□ -0.41
TRIO-202ENST00000344204 CMTM2Q8TAZ6 248 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 PLK3Q9H4B4 646 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 SLC25A19Q9HC21 320 aa12.52□□□□□ -0.41
TRIO-202ENST00000344204 MRPL2Q5T653 305 aaKnown RBP12.51□□□□□ -0.41
TRIO-202ENST00000344204 REEP6Q96HR9 211 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 IKZF5Q9H5V7 419 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 RTP2Q5QGT7 225 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 OR7E24Q6IFN5 339 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 TREM2Q9NZC2 230 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 MLF1P58340 268 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 HTRA3P83110 453 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 CXCL9Q07325 125 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 FAM26DQ5JW98 314 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 CYB5R2Q6BCY4 276 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 C11orf42Q8N5U0 333 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 ZNF738Q8NE65 137 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 ZNF133P52736 654 aaPredicted RBP12.51□□□□□ -0.41
TRIO-202ENST00000344204 DHRS2Q13268 280 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 SLC35G3Q8N808 338 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 FKBP11Q9NYL4 201 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 HOXD4P09016 255 aaPredicted RBP12.51□□□□□ -0.41
TRIO-202ENST00000344204 DPY19L2P2Q6ZN68 376 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 RPH3ALQ9UNE2 315 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 TBX19O60806 448 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 YIF1AO95070 293 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 CD3DP04234 171 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 RAB7AP51149 207 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 EFNA3P52797 238 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 CSNK1A1LQ8N752 337 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 WFIKKN2Q8TEU8 576 aa12.51□□□□□ -0.41
TRIO-202ENST00000344204 GPR61Q9BZJ8 451 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms