RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 FAM69BQ5VUD6 431 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 OR2W3Q7Z3T1 314 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 ARHGEF39Q8N4T4 335 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 CLEC1AQ8NC01 280 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 STT3BQ8TCJ2 826 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 TMPRSS5Q9H3S3 457 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM231Q9H6L2 316 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 PURGQ9UJV8 347 aaKnown RBP4.37□□□□□ -1.71
CSMD3-203ENST00000343508 LOC105371267A0A1B0GV96 52 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PEX12O00623 359 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FFAR1O14842 300 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 GATCO43716 136 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 NME2P22392 152 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SELENOPP49908 381 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 DHRS2Q13268 280 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 GPM6BQ13491 265 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FGGYQ96C11 551 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 EID2BQ96D98 161 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 OR1F2PQ96R84 312 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF426Q9BUY5 554 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 JAM3Q9BX67 310 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 C9J4A7 227 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 STMND1H3BQB6 276 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 K7ESM1 405 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TRHRP34981 398 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 MRPS34P82930 218 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 DCXRQ7Z4W1 244 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 OR56B2PQ8NGI1 322 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 OR9A4Q8NGU2 314 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SFT2D1Q8WV19 159 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PTDSS2Q9BVG9 487 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SAMD10Q9BYL1 202 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TGIF2Q9GZN2 237 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 GHRLQ9UBU3 117 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 A0A0B4J203 849 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM218A2RU14 115 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 C9orf170A2RU37 121 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 BTBD17A6NE02 478 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 CYB5BO43169 146 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FCMRO60667 390 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ETFDHQ16134 617 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 CD200R1LQ6Q8B3 271 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 Q6ZNB5 142 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 GPR32P1Q8NGA4 272 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 OR2G2Q8NGZ5 317 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SELENOIQ9C0D9 397 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 MED9Q9NWA0 146 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 APOBEC3BQ9UH17 382 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ST8SIA3O43173 380 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 CTNSO60931 367 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FCGR2AP12318 317 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FKBP2P26885 142 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM52BQ4KMG9 183 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 THEM4Q5T1C6 240 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM91Q6ZNR0 172 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 OR13C8Q8NGS7 320 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TMPRSS13Q9BYE2 586 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FN3KRPQ9HA64 309 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 NTNG1Q9Y2I2 539 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 H3BML4 177 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 CD37P11049 281 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 GRB2P62993 217 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 NFATC4Q14934 902 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FAM111BQ6SJ93 734 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 Q6ZRG5 221 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 P4HA3Q7Z4N8 544 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SYT9Q86SS6 491 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 C19orf47Q8N9M1 422 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF511Q8NB15 262 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 OR5M8Q8NGP6 311 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 LMX1AQ8TE12 382 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ABHD6Q9BV23 337 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 VDAC3Q9Y277 283 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FITM1A5D6W6 292 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ERVH48-1M5A8F1 160 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 CST4P01036 141 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 OR13C7P0DN81 318 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 BLVRBP30043 206 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 NPY4RP50391 375 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PNLIPRP3Q17RR3 467 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 TUSC1Q2TAM9 212 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 FAM219BQ5XKK7 198 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 AKR1E2Q96JD6 320 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 RBM24Q9BX46 236 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 CERS4Q9HA82 394 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PCDHGA1Q9Y5H4 931 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PRAMEF26H0Y7S4 382 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 AP4M1O00189 453 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 LILRB5O75023 590 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 CNOT4O95628 575 aaKnown RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 HPNP05981 417 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 HTD2P86397 168 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ATPAF1Q5TC12 328 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-203ENST00000343508 METTL9Q9H1A3 318 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 ZFP64Q9NPA5 681 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PADI1Q9ULC6 663 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 SLC5A6Q9Y289 635 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 PAPPA2Q9BXP8 1791 aa4.36□□□□□ -1.71
CSMD3-203ENST00000343508 MAGEB4O15481 346 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms