RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 TEAD3Q99594 435 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 SLC25A21Q9BQT8 299 aaPredicted RBP11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 ZNF251Q9BRH9 671 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 SLC23A1Q9UHI7 598 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 IGHV3-15A0A0B4J1V0 119 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 ZNF727A8MUV8 499 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 BAK1Q16611 211 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 TAZQ16635 292 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 TBC1D28Q2M2D7 210 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 TMEM207Q6UWW9 146 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 FLVCR1Q9Y5Y0 555 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 EVPLQ92817 2033 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 ALX3O95076 343 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 SPNP16150 400 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 CPEP16870 476 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 SOX18P35713 384 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 FAM26DQ5JW98 314 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 OR6M1Q8NGM8 313 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 C1QTNF3Q9BXJ4 246 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 RIMS4Q9H426 269 aaPredicted RBP11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 ADAM29Q9UKF5 820 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 B3GALT5Q9Y2C3 310 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 LOC102724200A0A096LPH7 203 aaPredicted RBP11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 G3V3Q6 166 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 SIRPB1O00241 398 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 PTBP3O95758 552 aaKnown RBP11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 FPR3P25089 353 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 TRMT12Q53H54 448 aaKnown RBP11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 SLC39A11Q8N1S5 342 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 PELI3Q8N2H9 469 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 OR13C8Q8NGS7 320 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 BARX1Q9HBU1 254 aaPredicted RBP11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 SLC5A6Q9Y289 635 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 GPX5O75715 221 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 OR5G3P0C626 314 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 RRASP10301 218 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 PKDCCQ504Y2 493 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 LIPNQ5VXI9 398 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 PAQR9Q6ZVX9 377 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 NKAIN3Q8N8D7 197 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 KDF1Q8NAX2 398 aaPredicted RBP11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 OR6K3Q8NGY3 331 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 OR52N1Q8NH53 320 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 GOT1L1Q8NHS2 421 aaPredicted RBP11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 MAGT1Q9H0U3 335 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 MN1Q10571 1320 aaPredicted RBP11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 H7BYZ3 331 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 MTHFD2P13995 350 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 L3MBTL4Q8NA19 623 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 SLC22A12Q96S37 553 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 PIGQQ9BRB3 760 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 KPTNQ9Y664 436 aa11.13□□□□□ -0.63
SEMA6A-202ENST00000343348 NKX6-3A6NJ46 265 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 FAM166BA8MTA8 275 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 PLPP1O14494 284 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 SUMO1P63165 101 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 OR8G1Q15617 311 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 ALKBH6Q3KRA9 238 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 C1orf140Q5VVS0 124 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 LAMB4A4D0S4 1761 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 RAF1P04049 648 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 SLC48A1Q6P1K1 146 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 OR13D1Q8NGV5 346 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 SRRQ9GZT4 340 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 ZNF749O43361 778 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 SLC25A6P12236 298 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 GJA4P35212 333 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 LIM2P55344 173 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 YRDCQ86U90 279 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 GJC3Q8NFK1 279 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 USP3Q9Y6I4 520 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 CD1CP29017 333 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 OR1J2Q8NGS2 313 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 OR51F2Q8NH61 342 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 ISL2Q96A47 359 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 OR5H15A6NDH6 313 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 OR5H1A6NKK0 313 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 RFPL4AA6NLU0 287 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 RFPL4AL1F8VTS6 287 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 OR7C2O60412 319 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 GIPP09681 153 aaPredicted RBP11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 HRH1P35367 487 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 RPS16P62249 146 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 CSNK1G2P78368 415 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 SNTB1Q13884 538 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 ZNF528Q3MIS6 628 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 ZNF687Q8N1G0 1237 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 OR10G3Q8NGC4 313 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 SLC25A32Q9H2D1 315 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 TMPRSS5Q9H3S3 457 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 SEMA6CQ9H3T2 930 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 AUNIPQ9H7T9 357 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 GDE1Q9NZC3 331 aa11.12□□□□□ -0.63
SEMA6A-202ENST00000343348 CER1O95813 267 aa11.11□□□□□ -0.63
SEMA6A-202ENST00000343348 SNRPGP62308 76 aaKnown RBP11.11□□□□□ -0.63
SEMA6A-202ENST00000343348 FABP9Q0Z7S8 132 aa11.11□□□□□ -0.63
SEMA6A-202ENST00000343348 MFSD12Q6NUT3 480 aa11.11□□□□□ -0.63
SEMA6A-202ENST00000343348 CSNK1G1Q9HCP0 422 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms