RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 METTL17Q9H7H0 456 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-202ENST00000342494 TMEM30AQ9NV96 361 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 SLC17A4Q9Y2C5 497 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 MEIKINA0A087WXM9 373 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 NPY4RP50391 375 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 PTRH1Q86Y79 214 aaKnown RBP13.68□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF573Q86YE8 665 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 ZFP82Q8N141 532 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 CLDN22Q8N7P3 220 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 ISL2Q96A47 359 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 OR5M11Q96RB7 305 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF436Q9C0F3 470 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-202ENST00000342494 CEPT1Q9Y6K0 416 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 A0A0D9SG52 128 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 FRG2CA6NGY1 282 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 SOD1P00441 154 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 LAP3P28838 519 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 INSM1Q01101 510 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-202ENST00000342494 SYT14P1Q58G82 188 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF626Q68DY1 528 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 RFPL4BQ6ZWI9 263 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 FUNDC1Q8IVP5 155 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 FAM213BQ8TBF2 198 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 PSD2Q9BQI7 771 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 ISYNA1Q9NPH2 558 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 RP1L1Q8IWN7 2480 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-202ENST00000342494 A0A087WV62 115 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 AGAP14A8MT82 685 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 HBE1P02100 147 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 EBPQ15125 230 aaKnown RBP13.67□□□□□ -0.22
UBE3B-202ENST00000342494 LSRQ86X29 649 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-202ENST00000342494 GCNT2Q8N0V5 402 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 PELI3Q8N2H9 469 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 MYH15Q9Y2K3 1946 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 XRCC2O43543 280 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 SULT1B1O43704 296 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 CTXN2P0C2S0 81 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 OR1C1Q15619 314 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 MDGA2Q7Z553 956 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 OR5M9Q8NGP3 310 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 TXN2Q99757 166 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 ARV1Q9H2C2 271 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 MED29Q9NX70 200 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 FBXL2Q9UKC9 423 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 B3GALT5Q9Y2C3 310 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 FADS1O60427 444 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 OR10J4P0C629 311 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 C1orf210Q8IVY1 113 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 FAM109AQ8N4B1 249 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 C17orf50Q8WW18 174 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 ACOXLQ9NUZ1 547 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 C7orf72A4D263 438 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 HLA-DOBP13765 273 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 RPL18Q07020 188 aaKnown RBP13.67□□□□□ -0.22
UBE3B-202ENST00000342494 OR2V1Q8NHB1 315 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 ROBO4Q8WZ75 1007 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 RDH5Q92781 318 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 SAV1Q9H4B6 383 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-202ENST00000342494 TAS2R4Q9NYW5 299 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 PTTG3PQ9NZH4 202 aa13.67□□□□□ -0.22
UBE3B-202ENST00000342494 SBK2P0C263 348 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 HIST1H1CP16403 213 aaKnown RBP13.66□□□□□ -0.22
UBE3B-202ENST00000342494 TRA2AQ13595 282 aaKnown RBP eCLIP13.66□□□□□ -0.22
UBE3B-202ENST00000342494 OR2A2Q6IF42 318 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 MAVSQ7Z434 540 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 FBXL6Q8N531 539 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 OR1M1Q8NGA1 313 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 OR10K1Q8NGX5 313 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 OR52N5Q8NH56 324 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 SPACA9Q96E40 222 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-202ENST00000342494 SLC35E1Q96K37 410 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF225Q9UK10 706 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 CRYZL1O95825 349 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 NME1P15531 152 aaKnown RBP13.66□□□□□ -0.22
UBE3B-202ENST00000342494 OR2AE1Q8NHA4 323 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 TTC9Q92623 222 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 MYEOVQ96EZ4 313 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 LINC00615Q96LM1 132 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-202ENST00000342494 MBOAT4Q96T53 435 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 CTSFQ9UBX1 484 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 FCMRO60667 390 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 CPEP16870 476 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 GPR12P47775 334 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 FAM74A1Q5RGS3 127 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 GUSBP11Q6P575 273 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 OR2A1Q8NGT9 310 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 RHOXF1Q8NHV9 184 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 CORO2AQ92828 525 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 S1PR3Q99500 378 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 TRDV1A0A1B0GX56 115 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 NRASP01111 189 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 CALCBP10092 127 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 SNRPGP62308 76 aaKnown RBP13.66□□□□□ -0.22
UBE3B-202ENST00000342494 MC2RQ01718 297 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 OTUD1Q5VV17 481 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-202ENST00000342494 OR8G2PQ6IF36 304 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 FJX1Q86VR8 437 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 OR1S2Q8NGQ3 325 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 GATA6Q92908 595 aa13.66□□□□□ -0.22
UBE3B-202ENST00000342494 TAS2R5Q9NYW4 299 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms