RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 CALCBP10092 127 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 MAGEB1P43366 347 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 ZNF573Q86YE8 665 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 THNSL2Q86YJ6 484 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 OR2A14Q96R47 310 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 ATF6BQ99941 703 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 GMPR2Q9P2T1 348 aaKnown RBP13.9□□□□□ -0.18
COL11A2-201ENST00000341947 PPP1R3CQ9UQK1 317 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 B3GALT5Q9Y2C3 310 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 APEX1P27695 318 aaKnown RBP13.9□□□□□ -0.18
COL11A2-201ENST00000341947 SDHAP31040 664 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 CAPZBP47756 277 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 YIPF5Q969M3 257 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 ZFP92A6NM28 416 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 NKX2-1P43699 371 aaPredicted RBP13.9□□□□□ -0.18
COL11A2-201ENST00000341947 ANKRD16Q6P6B7 361 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 DEFB108BQ8NET1 73 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 FBXO4Q9UKT5 387 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 A0A1W2PNR3 127 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 A0A1W2PR48 441 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 XRCC2O43543 280 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 PPICP45877 212 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 RTN4RL1Q86UN2 441 aaPredicted RBP13.9□□□□□ -0.18
COL11A2-201ENST00000341947 ST8SIA1Q92185 356 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 LRFN5Q96NI6 719 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 ZNF346Q9UL40 294 aaKnown RBP13.9□□□□□ -0.18
COL11A2-201ENST00000341947 FGF17O60258 216 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 CPEP16870 476 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 CCR9P51686 369 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 NHSL2Q5HYW2 709 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 USP51Q70EK9 711 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 OXGR1Q96P68 337 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 TEAD3Q99594 435 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 KDM3BQ7LBC6 1761 aa13.9□□□□□ -0.18
COL11A2-201ENST00000341947 POM121BA6NF01 834 aa13.9□□□□□ -0.19
COL11A2-201ENST00000341947 TRABD2BA6NFA1 517 aa13.9□□□□□ -0.19
COL11A2-201ENST00000341947 FABP7O15540 132 aa13.9□□□□□ -0.19
COL11A2-201ENST00000341947 PIPP12273 146 aaPredicted RBP13.9□□□□□ -0.19
COL11A2-201ENST00000341947 DTYMKP23919 212 aa13.9□□□□□ -0.19
COL11A2-201ENST00000341947 TMEM81Q6P7N7 255 aa13.9□□□□□ -0.19
COL11A2-201ENST00000341947 PELI3Q8N2H9 469 aa13.9□□□□□ -0.19
COL11A2-201ENST00000341947 TMEM102Q8N9M5 508 aaPredicted RBP13.9□□□□□ -0.19
COL11A2-201ENST00000341947 OR2G3Q8NGZ4 309 aa13.9□□□□□ -0.19
COL11A2-201ENST00000341947 NMES1Q9C002 83 aa13.9□□□□□ -0.19
COL11A2-201ENST00000341947 UBR2Q8IWV8 1755 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 HMGN4O00479 90 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 EMP3P54852 163 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 PATE1Q8WXA2 126 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ZIC5Q96T25 663 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ASH2LQ9UBL3 628 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 PRRT4C9JH25 899 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 TNFSF11O14788 317 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 GLULP15104 373 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 UBE2IP63279 158 aaKnown RBP13.89□□□□□ -0.19
COL11A2-201ENST00000341947 DUSP2Q05923 314 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 SLC51BQ86UW2 128 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 S1PR3Q99500 378 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 SLC5A6Q9Y289 635 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 A0A096LPE4 126 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 A0A1W2PPZ6 126 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 M0R135 149 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 BHLHE40O14503 412 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 PLRG1O43660 514 aaKnown RBP13.89□□□□□ -0.19
COL11A2-201ENST00000341947 CTRB1P17538 263 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 TAGLN2P37802 199 aaKnown RBP13.89□□□□□ -0.19
COL11A2-201ENST00000341947 CLDN15P56746 228 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 CLN3Q13286 438 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ACKR1Q16570 336 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 CTRB2Q6GPI1 263 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 SSX9Q7RTT3 188 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 MRPS24Q96EL2 167 aaKnown RBP13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ZNF799Q96GE5 643 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 PDCD1LG2Q9BQ51 273 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 TUBB1Q9H4B7 451 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 QPCTLQ9NXS2 382 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 MEIKINA0A087WXM9 373 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ARPC3O15145 178 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 GALR2O43603 387 aaPredicted RBP13.89□□□□□ -0.19
COL11A2-201ENST00000341947 CLEC2LP0C7M8 214 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ZNF85Q03923 595 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 LAIR1Q6GTX8 287 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 NLRC3Q7RTR2 1065 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 CAMKMTQ7Z624 323 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ADGRG3Q86Y34 549 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 RBM45Q8IUH3 476 aaKnown RBP13.89□□□□□ -0.19
COL11A2-201ENST00000341947 UBAC2Q8NBM4 344 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 REEP6Q96HR9 211 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 LYSMD1Q96S90 227 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 CTSFQ9UBX1 484 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 CLEC2DQ9UHP7 191 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ZNF628Q5EBL2 1059 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 KMT5CQ86Y97 462 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 SLCO4A1Q96BD0 722 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 ZNF331Q9NQX6 463 aaPredicted RBP13.89□□□□□ -0.19
COL11A2-201ENST00000341947 SLC22A11Q9NSA0 550 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 PPT2Q9UMR5 302 aa13.89□□□□□ -0.19
COL11A2-201ENST00000341947 TEX51A0A1B0GUA7 166 aa13.88□□□□□ -0.19
COL11A2-201ENST00000341947 FAM157BP0CG42 384 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms