RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 SLC18B1Q6NT16 456 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 LPCAT3Q6P1A2 487 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 KCTD18Q6PI47 426 aaPredicted RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 PRSS45Q7RTY3 260 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 SLC36A1Q7Z2H8 476 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 KRT77Q7Z794 578 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 MEIOBQ8N635 442 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 NKAIN3Q8N8D7 197 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 ZNF441Q8N8Z8 693 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 ZNF511Q8NB15 262 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 SUN5Q8TC36 379 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 ZNF721Q8TF20 911 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 SMAP2Q8WU79 429 aaPredicted RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 PNPLA2Q96AD5 504 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 MMABQ96EY8 250 aaPredicted RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 RBP7Q96R05 134 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 MAP3K3Q99759 626 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 SPRY4Q9C004 299 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 NXF5Q9H1B4 397 aaKnown RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 SLC25A18Q9H1K4 315 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 TSPAN10Q9H1Z9 355 aaPredicted RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 TXNIPQ9H3M7 391 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 METTL17Q9H7H0 456 aaPredicted RBP9.68□□□□□ -0.86
RTN3-201ENST00000338850 FANCFQ9NPI8 374 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 STARD5Q9NSY2 213 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 UPB1Q9UBR1 384 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 CYB5R1Q9UHQ9 305 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 PLEKHA6Q9Y2H5 1048 aa9.68□□□□□ -0.86
RTN3-201ENST00000338850 IGLV1-36A0A0B4J1U3 117 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 A0A1W2PPK0 400 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 PRSS37A4D1T9 235 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 A6NIZ1 184 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 BLOC1S5-TXNDC5H3BN57 136 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 PYCARD-AS1I3L0S3 204 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 XKRYO14609 159 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 BET1O15155 118 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 MAGEB4O15481 346 aaPredicted RBP9.67□□□□□ -0.86
RTN3-201ENST00000338850 OIP5O43482 229 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 OR2T1O43869 369 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 RAD1O60671 282 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 SCGNO76038 276 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 AKR7A3O95154 331 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 PDGFAP04085 211 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 ISG15P05161 165 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 CD2P06729 351 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 LIFP15018 202 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 IGFBP3P17936 291 aaPredicted RBP9.67□□□□□ -0.86
RTN3-201ENST00000338850 RAB6AP20340 208 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 MAOAP21397 527 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 ACHEP22303 614 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 CRABP1P29762 137 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 DCTDP32321 178 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 CD96P40200 585 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 KIR3DL2P43630 455 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 PPM1FP49593 454 aaPredicted RBP9.67□□□□□ -0.86
RTN3-201ENST00000338850 SELENOPP49908 381 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 POLR2HP52434 150 aaKnown RBP9.67□□□□□ -0.86
RTN3-201ENST00000338850 RAP1BP61224 184 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 RAP1AP62834 184 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 MC2RQ01718 297 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 ZNF117Q03924 483 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 OPCMLQ14982 345 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 EBPQ15125 230 aaKnown RBP9.67□□□□□ -0.86
RTN3-201ENST00000338850 RAB11BQ15907 218 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 TMEM255AQ5JRV8 349 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 NHLRC3Q5JS37 347 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 DCAF12Q5T6F0 453 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 GLT8D1Q68CQ7 371 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 DNM1P34Q6PK57 102 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 Q6ZTK2 550 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 UTS2BQ765I0 119 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 GRINAQ7Z429 371 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 KMT5CQ86Y97 462 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 TMEM151BQ8IW70 566 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 SHISA5Q8N114 240 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 FTMTQ8N4E7 242 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 IL22RA1Q8N6P7 574 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 ZNF433Q8N7K0 673 aaPredicted RBP9.67□□□□□ -0.86
RTN3-201ENST00000338850 ZNF676Q8N7Q3 588 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 TMEM229BQ8NBD8 167 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 OR6M1Q8NGM8 313 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 OR6N2Q8NGY6 317 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 GPX8Q8TED1 209 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 CCDC107Q8WV48 283 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 DAZLQ92904 295 aaKnown RBP9.67□□□□□ -0.86
RTN3-201ENST00000338850 TMEM106AQ96A25 262 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 ZDHHC12Q96GR4 267 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 SLC25A21Q9BQT8 299 aaPredicted RBP9.67□□□□□ -0.86
RTN3-201ENST00000338850 PTDSS2Q9BVG9 487 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 POTEKPQ9BYX7 375 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 TTTY10Q9BZA0 68 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 KCNN3Q9UGI6 736 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 ING1Q9UK53 422 aaPredicted RBP9.67□□□□□ -0.86
RTN3-201ENST00000338850 B9D1Q9UPM9 204 aa9.67□□□□□ -0.86
RTN3-201ENST00000338850 A8MVM7 634 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 H3BUI4 141 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 ETV2O00321 342 aaPredicted RBP9.66□□□□□ -0.86
RTN3-201ENST00000338850 DCTN6O00399 190 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 LDLRAD4O15165 306 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 SRSF10O75494 262 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms