RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 MRPL22Q9NWU5 206 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 CLN6Q9NWW5 311 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 PLEK2Q9NYT0 353 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 EIF3KQ9UBQ5 218 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 CYB5R1Q9UHQ9 305 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 POU2F3Q9UKI9 436 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 EDARQ9UNE0 448 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 ATP23Q9Y6H3 246 aa10.35□□□□□ -0.75
SPTLC1-202ENST00000337841 H0YAE9 185 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 M0R129 80 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 DLGAP1O14490 977 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 CELA3BP08861 270 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 SPARCP09486 303 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 SLC2A5P22732 501 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 STOMP27105 288 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 APEX1P27695 318 aaKnown RBP10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 LOXP28300 417 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 HIST1H3AP68431 136 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 GALK2Q01415 458 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 ECH1Q13011 328 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 IL18R1Q13478 541 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 OCLNQ16625 522 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 HIST2H3PS2Q5TEC6 136 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 OTPQ5XKR4 325 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 ADAM5Q6NVV9 412 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF774Q6NX45 483 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 ARL9Q6T311 187 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 UNQ6126/PRO20091Q6UXV3 157 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 ZNF704Q6ZNC4 412 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 HIST2H3AQ71DI3 136 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 CDC20BQ86Y33 519 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 ERI1Q8IV48 349 aaKnown RBP10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 SETD9Q8NE22 299 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 CPEB3Q8NE35 698 aaKnown RBP10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 BBS1Q8NFJ9 593 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 RHOXF1Q8NHV9 184 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 NRG4Q8WWG1 115 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 UBE2FQ969M7 185 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 KRTAP3-2Q9BYR7 98 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 WNT5BQ9H1J7 359 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 WDR76Q9H967 626 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 MARCH7Q9H992 704 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 WARS2Q9UGM6 360 aaKnown RBP10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 LHFPL6Q9Y693 200 aa10.34□□□□□ -0.75
SPTLC1-202ENST00000337841 RER1O15258 196 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 DOK2O60496 412 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF35P13682 527 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 CCNOP22674 350 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 HTR1FP30939 366 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 ATP6V1E1P36543 226 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 CAPGP40121 348 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 CDH11P55287 796 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 ADARB1P78563 741 aaKnown RBP10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 IL5RAQ01344 420 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 RAB35Q15286 201 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 TAF13Q15543 124 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 PCK2Q16822 640 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 CCDC92Q53HC0 331 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 ELFN2Q5R3F8 820 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 SLC18B1Q6NT16 456 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 TMEM154Q6P9G4 183 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 CORO6Q6QEF8 472 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 B3GLCTQ6Y288 498 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 SLC16A9Q7RTY1 509 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 BCDIN3DQ7Z5W3 292 aaKnown RBP10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 LINC00346Q8IVM7 164 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 TIGD4Q8IY51 512 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 OR6N2Q8NGY6 317 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 OR1F12Q8NHA8 337 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 IPCEF1Q8WWN9 437 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 AKAP1Q92667 903 aaKnown RBP eCLIP10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF582Q96NG8 517 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 ADI1Q9BV57 179 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 YIPF3Q9GZM5 350 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 HDHD2Q9H0R4 259 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 HAO2Q9NYQ3 351 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 CISD1Q9NZ45 108 aaKnown RBP10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 GDF2Q9UK05 429 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 COMMD3-BMI1R4GMX3 469 aa10.33□□□□□ -0.76
SPTLC1-202ENST00000337841 IGHV2OR16-5A0A0B4J2B6 119 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 C5orf49A4QMS7 147 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 CCDC182A6NF36 153 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 OR6C6A6NF89 314 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 SHISA9B4DS77 424 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 ENTPD6O75354 484 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 PLAUP00749 431 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 RAD52P43351 418 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 HTR5AP47898 357 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 NUDT6P53370 316 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 POU4F2Q12837 409 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 EIF2B1Q14232 305 aaKnown RBP10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF672Q499Z4 452 aaPredicted RBP10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 LYPD4Q6UWN0 246 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 VASH1Q7L8A9 365 aaPredicted RBP10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 DPY19L4Q7Z388 723 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 DCXRQ7Z4W1 244 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF584Q8IVC4 421 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms