RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 Q8NA96 180 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 UPB1Q9UBR1 384 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 TRDV1A0A1B0GX56 115 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 AHRRA9YTQ3 701 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 GABRPO00591 440 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 RER1O15258 196 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 CD53P19397 219 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 NPR2P20594 1047 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 AGTR1P30556 359 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 UGT2B10P36537 528 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 MRPS34P82930 218 aaKnown RBP12.94□□□□□ -0.34
CBX3-201ENST00000337620 ALKBH1Q13686 389 aaKnown RBP12.94□□□□□ -0.34
CBX3-201ENST00000337620 KRTCAP3Q53RY4 240 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 GCNT2Q8N0V5 402 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 ABHD4Q8TB40 342 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 HAVCR2Q8TDQ0 301 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 RNF133Q8WVZ7 376 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 GMPPAQ96IJ6 420 aaPredicted RBP12.94□□□□□ -0.34
CBX3-201ENST00000337620 FOXB1Q99853 325 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 LINC00470Q9BZP3 86 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 SIAEQ9HAT2 523 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 FRRS1LQ9P0K9 344 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 FBXL3Q9UKT7 428 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 GTF2A1LQ9UNN4 478 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 GSTK1Q9Y2Q3 226 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 OR6C65A6NJZ3 312 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 RGS9O75916 674 aaPredicted RBP12.94□□□□□ -0.34
CBX3-201ENST00000337620 B4GALT1P15291 398 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 ENDOGQ14249 297 aaKnown RBP12.94□□□□□ -0.34
CBX3-201ENST00000337620 TRAM1Q15629 374 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 C9orf135Q5VTT2 229 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 TMEM91Q6ZNR0 172 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 MS4A15Q8N5U1 240 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 TEX19Q8NA77 164 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 OR13C5Q8NGS8 318 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 OR2G2Q8NGZ5 317 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 DYNC2LI1Q8TCX1 351 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 SH3GL3Q99963 347 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 GP6Q9HCN6 339 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 TMEM38BQ9NVV0 291 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 GALNT8Q9NY28 637 aa12.94□□□□□ -0.34
CBX3-201ENST00000337620 HSPB2A8KAH6 182 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 ZNF587BE7ETH6 402 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 ZNF254O75437 659 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 ZFPL1O95159 310 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 TPOP07202 933 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 FGF9P31371 208 aaPredicted RBP12.93□□□□□ -0.34
CBX3-201ENST00000337620 OPRL1P41146 370 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 TUBA1BP68363 451 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 FAPQ12884 760 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 TAF13Q15543 124 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 HSPB2Q16082 182 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 ODF4Q2M2E3 257 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
CBX3-201ENST00000337620 FAM27BQ5VT28 67 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 DEGS2Q6QHC5 323 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 TUBA1AQ71U36 451 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 OR10S1Q8NGN2 331 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 KCTD7Q96MP8 289 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 COQ7Q99807 217 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 GLRX2Q9NS18 164 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 TUBD1Q9UJT1 453 aa12.93□□□□□ -0.34
CBX3-201ENST00000337620 MAP1BP46821 2468 aaKnown RBP12.93□□□□□ -0.34
CBX3-201ENST00000337620 DVL2O14641 736 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 PNPP00491 289 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 ZNF324BQ6AW86 544 aaPredicted RBP12.92□□□□□ -0.34
CBX3-201ENST00000337620 CEACAM19Q7Z692 300 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 PRSS35Q8N3Z0 413 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 C9orf106Q8NAJ2 232 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 GJC3Q8NFK1 279 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 OR5AK2Q8NH90 309 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 WNT2BQ93097 391 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 PRSS50Q9UI38 385 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 ZNF281Q9Y2X9 895 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 FREM1Q5H8C1 2179 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 GTF3C1Q12789 2109 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 MED12LQ86YW9 2145 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 ZNF878C9JN71 531 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 SS18L1O75177 396 aaPredicted RBP12.92□□□□□ -0.34
CBX3-201ENST00000337620 CDRT1O95170 752 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 CD1AP06126 327 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 MXD1Q05195 221 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 MFGE8Q08431 387 aaPredicted RBP12.92□□□□□ -0.34
CBX3-201ENST00000337620 DGUOKQ16854 277 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 ACSM3Q53FZ2 586 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 KLHL24Q6TFL4 600 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 ZNF813Q6ZN06 617 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 SLC22A24Q8N4F4 322 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 ZNF676Q8N7Q3 588 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 RPS4Y2Q8TD47 263 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 PPP1R14AQ96A00 147 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 FBXO17Q96EF6 278 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 KCNN2Q9H2S1 579 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 TPK1Q9H3S4 243 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 BRD7Q9NPI1 651 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 EMC9Q9Y3B6 208 aa12.92□□□□□ -0.34
CBX3-201ENST00000337620 TMEM269A0A1B0GVZ9 245 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 GPRIN2O60269 458 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 SERPINA3P01011 423 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 GALP22466 123 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms