RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 ABHD16AO95870 558 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 NGFP01138 241 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 IGHV2-5P01817 119 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 TNFRSF1AP19438 455 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 EPHA1P21709 976 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 FPR2P25090 351 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 MPV17P39210 176 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 ACTG1P63261 375 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 TNFAIP6P98066 277 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-202ENST00000337571 LIPEQ05469 1076 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 SCRN3Q0VDG4 424 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 ZBED5Q49AG3 693 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 MBOAT2Q6ZWT7 520 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 VTCN1Q7Z7D3 282 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 OFCC1Q8IZS5 231 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 BPIFB2Q8N4F0 458 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 POU5F2Q8N7G0 328 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 NPEPL1Q8NDH3 523 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 OR13C2Q8NGS9 318 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 GTF3AQ92664 365 aaKnown RBP9.05□□□□□ -0.96
CAPN3-202ENST00000337571 FAM162AQ96A26 154 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 COG8Q96MW5 612 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 SUCNR1Q9BXA5 334 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 WNT5BQ9H1J7 359 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 RERGLQ9H628 205 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 EFCAB1Q9HAE3 211 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 MSL2Q9HCI7 577 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 MAN2C1Q9NTJ4 1040 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 SNX13Q9Y5W8 968 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 CACNG2Q9Y698 323 aa9.05□□□□□ -0.96
CAPN3-202ENST00000337571 J3KTA2 159 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 SURF4O15260 269 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 ICMTO60725 284 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 FOXH1O75593 365 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 UBOX5O94941 541 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 CD14P08571 375 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 SBK2P0C263 348 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 COX5BP10606 129 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 HTR5AP47898 357 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 LCN2P80188 198 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 PSG7Q13046 419 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 HSP90B2PQ58FF3 399 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 MTX3Q5HYI7 312 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 TBPL2Q6SJ96 375 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 RBMS3Q6XE24 437 aaKnown RBP9.04□□□□□ -0.96
CAPN3-202ENST00000337571 FOXL2NBQ6ZUU3 175 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 RFPL4BQ6ZWI9 263 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 TMPRSS11FQ6ZWK6 438 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 USP43Q70EL4 1123 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 ZNF771Q7L3S4 317 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-202ENST00000337571 SLC15A3Q8IY34 581 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 KLHL36Q8N4N3 616 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 C3orf56Q8N813 242 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 LRRC75AQ8NAA5 344 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 OR2Z1Q8NG97 314 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 FAM216AQ8WUB2 273 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 ZNF570Q96NI8 536 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 DCLRE1CQ96SD1 692 aaKnown RBP9.04□□□□□ -0.96
CAPN3-202ENST00000337571 RBM4Q9BWF3 364 aaKnown RBP9.04□□□□□ -0.96
CAPN3-202ENST00000337571 EMC7Q9NPA0 242 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 KRCC1Q9NPI7 259 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-202ENST00000337571 G6PC2Q9NQR9 355 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 POLE4Q9NR33 117 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 TBCCD1Q9NVR7 557 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 CMTM6Q9NX76 183 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 ARMCX1Q9P291 453 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 KLHL21Q9UJP4 597 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 TMEM5Q9Y2B1 443 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 NPTNQ9Y639 398 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 ANK2Q01484 3957 aa9.04□□□□□ -0.96
CAPN3-202ENST00000337571 A0A087WUU8 490 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 PRSS37A4D1T9 235 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 ZSCAN5BA6NJL1 495 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 H7C1C5 153 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 FFAR1O14842 300 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 SGCEO43556 437 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 DOK2O60496 412 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 DEAF1O75398 565 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-202ENST00000337571 SERPINA1P01009 418 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 CD55P08174 381 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 ADH4P08319 380 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 COX4I1P13073 169 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 GPR4P46093 362 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 LIMS1P48059 325 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 HILS1P60008 231 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 LCN6P62502 163 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 CDK5R2Q13319 367 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 ENDOGQ14249 297 aaKnown RBP9.03□□□□□ -0.96
CAPN3-202ENST00000337571 KRT72Q14CN4 511 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 CGB2Q6NT52 195 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 C1orf94Q6P1W5 598 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 CBLL1Q75N03 491 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 C1QL2Q7Z5L3 287 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 GLB1L2Q8IW92 636 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 OR5L1Q8NGL2 311 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 PTP4A1Q93096 173 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 CMBLQ96DG6 245 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 HSH2DQ96JZ2 352 aa9.03□□□□□ -0.96
CAPN3-202ENST00000337571 Q96M85 177 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms