RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 OR10S1Q8NGN2 331 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 OR13C9Q8NGT0 318 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 OR2T35Q8NGX2 323 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 LILRB4Q8NHJ6 448 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 RNF128Q8TEB7 428 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ZNF431Q8TF32 576 aaPredicted RBP7.89□□□□□ -1.15
SNCA-201ENST00000336904 MIB2Q96AX9 1013 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 HAVCR1Q96D42 359 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 FAM71F1Q96KD3 344 aaPredicted RBP7.89□□□□□ -1.15
SNCA-201ENST00000336904 ZCCHC4Q9H5U6 513 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 NOX3Q9HBY0 568 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ZFP64Q9NPA5 681 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 MRPL39Q9NYK5 338 aaKnown RBP7.89□□□□□ -1.15
SNCA-201ENST00000336904 EIF3KQ9UBQ5 218 aaKnown RBP7.89□□□□□ -1.15
SNCA-201ENST00000336904 STEAP1Q9UHE8 339 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 OR52A1Q9UKL2 312 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 SLC5A6Q9Y289 635 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 NUBP2Q9Y5Y2 271 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 TMEM14AQ9Y6G1 99 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 A0A1W2PP11 408 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ZFAND5O76080 213 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 WDPCPO95876 746 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 C1QBP02746 253 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 UMODP07911 640 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 PTBP1P26599 531 aaKnown RBP eCLIP7.89□□□□□ -1.15
SNCA-201ENST00000336904 ZNF81P51508 661 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 CLRN1P58418 232 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 RAET1LQ5VY80 246 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 TMED4Q7Z7H5 227 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 FAM219AQ8IW50 185 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 TCTE3Q8IZS6 198 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 OR51S1Q8NGJ8 323 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 OR4C16Q8NGL9 310 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 OR51E1Q8TCB6 317 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ZFAND1Q8TCF1 268 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 RPS4Y2Q8TD47 263 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ST7LQ8TDW4 575 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ADAT3Q96EY9 351 aaPredicted RBP7.89□□□□□ -1.15
SNCA-201ENST00000336904 PCED1AQ9H1Q7 454 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ZNF319Q9P2F9 582 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 PPIEQ9UNP9 301 aaKnown RBP7.89□□□□□ -1.15
SNCA-201ENST00000336904 SPTBN2O15020 2390 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 CNOT1A5YKK6 2376 aaKnown RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 TRBV5-7A0A0A0MS05 114 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 OR6C76A6NM76 312 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 E9PLN8 166 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 GABARAPH6UMI1 98 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 LAMTOR5O43504 91 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 OR2T1O43869 369 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 SPINK2P20155 84 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 MAPK3P27361 379 aaPredicted RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 RASGEF1BQ0VAM2 473 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 RAB11BQ15907 218 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 SGCAQ16586 387 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 ZNF782Q6ZMW2 699 aaPredicted RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 KCTD20Q7Z5Y7 419 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 PLCZ1Q86YW0 608 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 C9orf62Q8N4C0 152 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 OR10H5Q8NGA6 315 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 OR52N4Q8NGI2 321 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 MCHR2Q969V1 340 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 DDIT4LQ96D03 193 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 SLAMF6Q96DU3 332 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 ZNF837Q96EG3 531 aaPredicted RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 KCNK17Q96T54 332 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 DPCDQ9BVM2 203 aaPredicted RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 VSX1Q9NZR4 365 aaPredicted RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 SEMA5BQ9P283 1151 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 TMA7Q9Y2S6 64 aaKnown RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 B3GALT1Q9Y5Z6 326 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 ANKRD34BA5PLL1 514 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 GGT3PA6NGU5 568 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 GLSO94925 669 aaPredicted RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 PATE4P0C8F1 98 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 PSMB1P20618 241 aaKnown RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 CLDN17P56750 224 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 SCGB2B2Q4G0G5 96 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 OR52W1Q6IF63 320 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 KCTD18Q6PI47 426 aaPredicted RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 BTN2A1Q7KYR7 527 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 CHMP1BQ7LBR1 199 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 FGD2Q7Z6J4 655 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 CD163Q86VB7 1156 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 CATSPERDQ86XM0 798 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 DTX1Q86Y01 620 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 KMT5CQ86Y97 462 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 GVQW1Q8N7I0 195 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 CHST4Q8NCG5 386 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 SPACA9Q96E40 222 aaPredicted RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 GINS4Q9BRT9 223 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 DUSP23Q9BVJ7 150 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 TGIF2Q9GZN2 237 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 G6PC2Q9NQR9 355 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 MGAT4CQ9UBM8 478 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 DNAJC13O75165 2243 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 ZNF407Q9C0G0 2248 aa7.88□□□□□ -1.15
SNCA-201ENST00000336904 MAP1BP46821 2468 aaKnown RBP7.88□□□□□ -1.15
SNCA-201ENST00000336904 COL5A1P20908 1838 aaPredicted RBP7.87□□□□□ -1.15
SNCA-201ENST00000336904 IGLV3-12A0A075B6K2 115 aa7.87□□□□□ -1.15
SNCA-201ENST00000336904 D6RAR5 112 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms