RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 SEC61A1P61619 476 aaKnown RBP20.56■□□□□ 0.88
CDKN3-202ENST00000335183 RAP1AP62834 184 aa20.56■□□□□ 0.88
CDKN3-202ENST00000335183 ZNF154Q13106 437 aa20.56■□□□□ 0.88
CDKN3-202ENST00000335183 NPEPL1Q8NDH3 523 aa20.56■□□□□ 0.88
CDKN3-202ENST00000335183 ZNF747Q9BV97 191 aa20.56■□□□□ 0.88
CDKN3-202ENST00000335183 PATZ1Q9HBE1 687 aaKnown RBP20.56■□□□□ 0.88
CDKN3-202ENST00000335183 POLE4Q9NR33 117 aa20.56■□□□□ 0.88
CDKN3-202ENST00000335183 RHCGQ9UBD6 479 aa20.56■□□□□ 0.88
CDKN3-202ENST00000335183 ZNF69Q9UC07 566 aa20.56■□□□□ 0.88
CDKN3-202ENST00000335183 NUP50Q9UKX7 468 aa20.56■□□□□ 0.88
CDKN3-202ENST00000335183 TRAPPC2LH3BP13 241 aa20.55■□□□□ 0.88
CDKN3-202ENST00000335183 DOK2O60496 412 aa20.55■□□□□ 0.88
CDKN3-202ENST00000335183 KDELR2P33947 212 aa20.55■□□□□ 0.88
CDKN3-202ENST00000335183 HTR5AP47898 357 aa20.55■□□□□ 0.88
CDKN3-202ENST00000335183 SYT9Q86SS6 491 aa20.55■□□□□ 0.88
CDKN3-202ENST00000335183 NRMQ8IXM6 262 aa20.55■□□□□ 0.88
CDKN3-202ENST00000335183 SAMD8Q96LT4 415 aa20.55■□□□□ 0.88
CDKN3-202ENST00000335183 TMEM120AQ9BXJ8 343 aa20.55■□□□□ 0.88
CDKN3-202ENST00000335183 TBCCD1Q9NVR7 557 aa20.55■□□□□ 0.88
CDKN3-202ENST00000335183 HTR3EA5X5Y0 456 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 DNAJC9-AS1A6NH13 148 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 TMPRSS2O15393 492 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 ZNF12P17014 697 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 FUT4P22083 530 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 PRTN3P24158 256 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 BTG1P62324 171 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 TMEM155Q4W5P6 130 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 SHISA2Q6UWI4 295 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 Q6ZR03 302 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 DOK3Q7L591 496 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 OAFQ86UD1 273 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 BCL6BQ8N143 479 aaPredicted RBP20.54■□□□□ 0.88
CDKN3-202ENST00000335183 ZNF283Q8N7M2 679 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 ITLN1Q8WWA0 313 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 GPA33Q99795 319 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 MRI1Q9BV20 369 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 MAN2C1Q9NTJ4 1040 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 PLEK2Q9NYT0 353 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 PPP1R3CQ9UQK1 317 aa20.54■□□□□ 0.88
CDKN3-202ENST00000335183 MGAM2Q2M2H8 2515 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 EFCAB9A8MZ26 197 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 FAM220BPB1ANY3 271 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 HMGB1P1B2RPK0 211 aaPredicted RBP20.53■□□□□ 0.88
CDKN3-202ENST00000335183 KCNAB3O43448 404 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 COX5BP10606 129 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 SLC6A9P48067 706 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 SELENOWP63302 87 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 SCRN3Q0VDG4 424 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 ZMYND11Q15326 602 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 COQ5Q5HYK3 327 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 KLF17Q5JT82 389 aaPredicted RBP20.53■□□□□ 0.88
CDKN3-202ENST00000335183 C1orf94Q6P1W5 598 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 OR2T12Q8NG77 320 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 OR13C2Q8NGS9 318 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 CMBLQ96DG6 245 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 FNDC11Q9BVV2 318 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 INSIG2Q9Y5U4 225 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 DOCK11Q5JSL3 2073 aa20.53■□□□□ 0.88
CDKN3-202ENST00000335183 J3KTA2 159 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 SGCEO43556 437 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 NPPAP01160 153 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 KITLGP21583 273 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 RPL4P36578 427 aaKnown RBP20.52■□□□□ 0.88
CDKN3-202ENST00000335183 PRKCDQ05655 676 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 BAMBIQ13145 260 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 LRRC28Q86X40 367 aaPredicted RBP20.52■□□□□ 0.88
CDKN3-202ENST00000335183 LZICQ8WZA0 190 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 GRHPRQ9UBQ7 328 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 IL19Q9UHD0 177 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 POLR3KQ9Y2Y1 108 aaPredicted RBP20.52■□□□□ 0.88
CDKN3-202ENST00000335183 STARD10Q9Y365 291 aa20.52■□□□□ 0.88
CDKN3-202ENST00000335183 BBIP1A8MTZ0 92 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 SF3A3Q12874 501 aaKnown RBP eCLIP20.51■□□□□ 0.87
CDKN3-202ENST00000335183 KLF10Q13118 480 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 FHL1Q13642 323 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 TRAM2Q15035 370 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 ANKDD1AQ495B1 522 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 ESCO2Q56NI9 601 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 PRR31Q5SQ13 230 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 OFCC1Q8IZS5 231 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 SLC7A6Q92536 515 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 OR2V2Q96R30 315 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 SIGLEC11Q96RL6 698 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 WACQ9BTA9 647 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 ZMAT3Q9HA38 289 aaKnown RBP20.51■□□□□ 0.87
CDKN3-202ENST00000335183 OR5V1Q9UGF6 321 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 ADAM18Q9Y3Q7 739 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 SNX13Q9Y5W8 968 aa20.51■□□□□ 0.87
CDKN3-202ENST00000335183 LOC100653049A0A140TA62 436 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 A8MXK9 166 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 XKRYO14609 159 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 SURF4O15260 269 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 KRT34O76011 436 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 TUBG1P23258 451 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 GPR4P46093 362 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 SLC9A3P48764 834 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 ERFP50548 548 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 MAPRE2Q15555 327 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 TUSC1Q2TAM9 212 aa20.5■□□□□ 0.87
CDKN3-202ENST00000335183 OTPQ5XKR4 325 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms