RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SLC22A24Q8N4F4 322 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 OR52N5Q8NH56 324 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 SLC7A6Q92536 515 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 TEX12Q9BXU0 123 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 PRRG3Q9BZD7 231 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 ERVK-18Q9QC07 812 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 ASH2LQ9UBL3 628 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 CLEC2DQ9UHP7 191 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 A0A1B0GUH1 482 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 CLPXO76031 633 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 CELA3BP08861 270 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 SPARCP09486 303 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 CRABP1P29762 137 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 CHRNB4P30926 498 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 MTNR1AP48039 350 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 ADAM8P78325 824 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 HSF2Q03933 536 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 TFF3Q07654 80 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 WDR31Q8NA23 367 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 OR52I1Q8NGK6 324 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 BCL2L2Q92843 193 aaPredicted RBP14.43□□□□□ -0.1
SHOX-201ENST00000334060 S100PBPQ96BU1 408 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 MAP6Q96JE9 813 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 SLC5A6Q9Y289 635 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 ZNF593O00488 134 aaPredicted RBP14.43□□□□□ -0.1
SHOX-201ENST00000334060 MSTNO14793 375 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 FAM20BO75063 409 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 SBK2P0C263 348 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 CRHBPP24387 322 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 BMXP51813 675 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 GLO1Q04760 184 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 TBRG1Q3YBR2 411 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 SFRP5Q5T4F7 317 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 HDDC2Q7Z4H3 204 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 ZNF649Q9BS31 505 aa14.43□□□□□ -0.1
SHOX-201ENST00000334060 NPDC1Q9NQX5 325 aaPredicted RBP14.43□□□□□ -0.1
SHOX-201ENST00000334060 H2AFY2Q9P0M6 372 aaPredicted RBP14.43□□□□□ -0.1
SHOX-201ENST00000334060 HRNRQ86YZ3 2850 aaPredicted RBP14.43□□□□□ -0.1
SHOX-201ENST00000334060 CENPBD1B2RD01 187 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 J3QRE1 110 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 SLC22A1O15245 554 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 CCL2P13500 99 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 MRPS34P82930 218 aaKnown RBP14.42□□□□□ -0.1
SHOX-201ENST00000334060 LILRB4Q8NHJ6 448 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 AKR7LQ8NHP1 331 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 CA5BP1Q8WTZ4 195 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 ZC3HAV1LQ96H79 300 aaKnown RBP14.42□□□□□ -0.1
SHOX-201ENST00000334060 PSORS1C1Q9UIG5 152 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 HSPE1-MOB4S4R3N1 261 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 A0A1W2PQL4 384 aaPredicted RBP14.42□□□□□ -0.1
SHOX-201ENST00000334060 CIB4A0PJX0 185 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 C5orf63A6NC05 138 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 CLDN25C9JDP6 229 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 ATE1O95260 518 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 ZNF32P17041 273 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 CAPZA2P47755 286 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 ZNF85Q03923 595 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 GID4Q8IVV7 300 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 MARCH7Q9H992 704 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 B3GAT2Q9NPZ5 323 aa14.42□□□□□ -0.1
SHOX-201ENST00000334060 SLC22A31A6NKX4 558 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 MSR1P21757 451 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 UGT2B10P36537 528 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 ETV1P50549 477 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 ZNF84P51523 738 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 GGTLC2Q14390 218 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 SLC18B1Q6NT16 456 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 SEZ6L2Q6UXD5 910 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 BEND4Q6ZU67 534 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 BHLHA15Q7RTS1 189 aaPredicted RBP14.41□□□□□ -0.1
SHOX-201ENST00000334060 DCXRQ7Z4W1 244 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 LHFPL3Q86UP9 236 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 CDC20BQ86Y33 519 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 ZNF584Q8IVC4 421 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 ZNF540Q8NDQ6 660 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 OR10H4Q8NGA5 316 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 LINC01560Q8TB33 94 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 INTS14Q96SY0 518 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 DCUN1D5Q9BTE7 237 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 FKBP14Q9NWM8 211 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 COQ3Q9NZJ6 369 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 NPAP1Q9NZP6 1156 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 CRYBG3Q68DQ2 2970 aa14.41□□□□□ -0.1
SHOX-201ENST00000334060 C12orf71A8MTZ7 269 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 MPZL2O60487 215 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 DOK2O60496 412 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 THBDP07204 575 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 DBHP09172 617 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 MMP7P09237 267 aaPredicted RBP14.4□□□□□ -0.1
SHOX-201ENST00000334060 CXCR4P61073 352 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 HGFACQ04756 655 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 ST3GAL4Q11206 333 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 RAB39AQ14964 217 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 TAB1Q15750 504 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 SLC35D3Q5M8T2 416 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 MEDAGQ5VYS4 303 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 ZNF774Q6NX45 483 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 SLC35F2Q8IXU6 374 aa14.4□□□□□ -0.1
SHOX-201ENST00000334060 CPEB3Q8NE35 698 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms