RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 ASH2LQ9UBL3 628 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 REV1Q9UBZ9 1251 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 GDF2Q9UK05 429 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-201ENST00000332345 NDRG4Q9ULP0 352 aaKnown RBP12.08□□□□□ -0.48
LIMS1-201ENST00000332345 POLR1DQ9Y2S0 133 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 LOC100509620A0A075B734 347 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 TMEM129A0AVI4 362 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 RIIAD1A6NNX1 92 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 FAM171A2A8MVW0 826 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 G3V2T6 193 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 GPRIN2O60269 458 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 NDUFS7O75251 213 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 F12P00748 615 aaPredicted RBP12.07□□□□□ -0.48
LIMS1-201ENST00000332345 IGHV4-39P01824 125 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 LCKP06239 509 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 ERCC1P07992 297 aaPredicted RBP12.07□□□□□ -0.48
LIMS1-201ENST00000332345 FAM157BP0CG42 384 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 EFNA4P52798 201 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 NUDT6P53370 316 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 TEKQ02763 1124 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 CLEC12BQ2HXU8 276 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 SLC27A4Q6P1M0 643 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 ZDHHC13Q8IUH4 622 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 SVOPLQ8N434 492 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 CYB561A3Q8NBI2 242 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 SLC37A3Q8NCC5 494 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 PROKR2Q8NFJ6 384 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 OR4Q3Q8NH05 313 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 VRK1Q99986 396 aaPredicted RBP12.07□□□□□ -0.48
LIMS1-201ENST00000332345 RAB1BQ9H0U4 201 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 CMC2Q9NRP2 79 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 PLEK2Q9NYT0 353 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 DUSP13Q9UII6 198 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 GPR160Q9UJ42 338 aa12.07□□□□□ -0.48
LIMS1-201ENST00000332345 SYNGR3O43761 229 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 SSX4O60224 188 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 DOK2O60496 412 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 GPANK1O95872 356 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 HMGN1P05114 100 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 GAAP10253 952 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 ZNF823P16415 610 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 ZNF3P17036 446 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 GRK5P34947 590 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 HTR5AP47898 357 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 PPOXP50336 477 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 BLVRAP53004 296 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 SLC25A1P53007 311 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 DSCR9P59020 149 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 ACTR3P61158 418 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 CRMP1Q14194 572 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 GINS1Q14691 196 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 MOGQ16653 247 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 VASH1Q7L8A9 365 aaPredicted RBP12.06□□□□□ -0.48
LIMS1-201ENST00000332345 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.06□□□□□ -0.48
LIMS1-201ENST00000332345 SLC26A10Q8NG04 563 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 OR1J1Q8NGS3 322 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 OR2AJ1Q8NGZ0 328 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 SYNPRQ8TBG9 265 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 C4orf45Q96LM5 186 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 RAB3IPQ96QF0 476 aaPredicted RBP12.06□□□□□ -0.48
LIMS1-201ENST00000332345 RHNO1Q9BSD3 238 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 RBM4Q9BWF3 364 aaKnown RBP12.06□□□□□ -0.48
LIMS1-201ENST00000332345 MRPL37Q9BZE1 423 aaKnown RBP12.06□□□□□ -0.48
LIMS1-201ENST00000332345 OR51B6Q9H340 312 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 MS4A5Q9H3V2 200 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 FN3KQ9H479 309 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 DYNLRB1Q9NP97 96 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 PAPOLBQ9NRJ5 636 aaKnown RBP12.06□□□□□ -0.48
LIMS1-201ENST00000332345 KCNG2Q9UJ96 466 aa12.06□□□□□ -0.48
LIMS1-201ENST00000332345 TFP02787 698 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 ZNF250P15622 560 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 ZNF23P17027 643 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 PAICSP22234 425 aaKnown RBP12.05□□□□□ -0.48
LIMS1-201ENST00000332345 TUBG1P23258 451 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 FMO3P31513 532 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 PYCR1P32322 319 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 CDK5Q00535 292 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 MEP1BQ16820 701 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 ZNF718Q3SXZ3 478 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 ZFP1Q6P2D0 407 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 FAHD1Q6P587 224 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 AMIGO2Q86SJ2 522 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 ICA1LQ8NDH6 482 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 OR1F12Q8NHA8 337 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 LRTOMTQ8WZ04 291 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 CENPNQ96H22 339 aaPredicted RBP12.05□□□□□ -0.48
LIMS1-201ENST00000332345 SYT3Q9BQG1 590 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 NMNAT2Q9BZQ4 307 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 SLCO1C1Q9NYB5 712 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.05□□□□□ -0.48
LIMS1-201ENST00000332345 ATPIF1Q9UII2 106 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 LHFPL6Q9Y693 200 aa12.05□□□□□ -0.48
LIMS1-201ENST00000332345 OR6C6A6NF89 314 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 M0R233 179 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 RER1O15258 196 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 ICMTO60725 284 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 ABHD16AO95870 558 aa12.04□□□□□ -0.48
LIMS1-201ENST00000332345 ADRA2AP08913 450 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms