RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 DCDC2BA2VCK2 349 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 NPIPB13A6NJU9 1138 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 ZNF814B7Z6K7 855 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 NPIPB4C9JG80 1138 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 TSC22D2O75157 780 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 CFPP27918 469 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 SFTPDP35247 375 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 RAD52P43351 418 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 GALK2Q01415 458 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 SPOCK1Q08629 439 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 CAMK2DQ13557 499 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 HYAL4Q2M3T9 481 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 PCGF3Q3KNV8 242 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 SLC25A53Q5H9E4 307 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 GLYATL3Q5SZD4 288 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 DNM1P46Q6ZS02 220 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 OR2M3Q8NG83 312 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 ZNF431Q8TF32 576 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 C15orf40Q8WUR7 153 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 OR5B2Q96R09 309 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 SEC22CQ9BRL7 303 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 PRMT8Q9NR22 394 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 SDHAF3Q9NRP4 125 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 HHLA2Q9UM44 414 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 PCDHGA5Q9Y5G8 931 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 IGLV3-32A0A0A0MS00 114 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 A0A1W2PQ72 361 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 CIB4A0PJX0 185 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 P2RY10O00398 339 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 AQP8O94778 261 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 DKK1O94907 266 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 FGF5P12034 268 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 IGFBP3P17936 291 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 HOXA6P31267 233 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 DNASE1L1P49184 302 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 PCOLCEQ15113 449 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 C3orf33Q6P1S2 294 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 WDSUB1Q8N9V3 476 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 DIABLOQ9NR28 239 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 MYEF2Q9P2K5 600 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 B3GALT1Q9Y5Z6 326 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 MEIKINA0A087WXM9 373 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 A0A1W2PNV4 684 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 D6RAR5 112 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 H7C417 338 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 RBBP9O75884 186 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 H2BFMP0C1H6 154 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 CCL4P13236 92 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 TDGF1P13385 188 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 ANXA7P20073 488 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 KLK2P20151 261 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 SELENOPP49908 381 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 GLT8D1Q68CQ7 371 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 NHLRC1Q6VVB1 395 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 LUZP2Q86TE4 346 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 WDR5BQ86VZ2 330 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 BPHLQ86WA6 291 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 OR4D10Q8NGI6 311 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 ELP5Q8TE02 316 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 RNF133Q8WVZ7 376 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 SLC25A28Q96A46 364 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 GUCD1Q96NT3 240 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 MRPL13Q9BYD1 178 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 ATG5Q9H1Y0 275 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 MTFP1Q9UDX5 166 aa13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 MRPS18BQ9Y676 258 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 CHCHD2Q9Y6H1 151 aaPredicted RBP13.25□□□□□ -0.29
CLCNKA-201ENST00000331433 A0A1W2PPL8 197 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 RAMP1O60894 148 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 HTR2CP28335 458 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 HTR2BP41595 481 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 P2RY4P51582 365 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 CARD17Q5XLA6 110 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 UEVLDQ8IX04 471 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 JAGN1Q8N5M9 183 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 OR10H5Q8NGA6 315 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 OR4K17Q8NGC6 315 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 SNAPC3Q92966 411 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 RBP7Q96R05 134 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 RANBP3Q9H6Z4 567 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 SLC23A1Q9UHI7 598 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 HRGP04196 525 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 UMODP07911 640 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 FSTP19883 344 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 MFAP5Q13361 173 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 SNTA1Q13424 505 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 OR4C16Q8NGL9 310 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 MR1Q95460 341 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 SLAMF6Q96DU3 332 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 FANCFQ9NPI8 374 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 DLL4Q9NR61 685 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 CYB5R1Q9UHQ9 305 aa13.24□□□□□ -0.29
CLCNKA-201ENST00000331433 A0A1B0GUH1 482 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 ANKRD34BA5PLL1 514 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 TTLL8A6PVC2 850 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 ICMTO60725 284 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 TGM6O95932 706 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 ACHEP22303 614 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 281.8 ms