RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SLC19A3Q9BZV2 496 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 SPAG4Q9NPE6 437 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 CMTM6Q9NX76 183 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 NDE1Q9NXR1 346 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 STAB2Q8WWQ8 2551 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 IGHV2-70DA0A0C4DH43 119 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 WI2-2373I1.2A0A1W2PRP0 233 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 FTCDNL1E5RQL4 147 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 TNFRSF13BO14836 293 aaPredicted RBP12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 RAB36O95755 333 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 GRPRP30550 384 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 GIPRP48546 466 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 ZNF81P51508 661 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 PSME3P61289 254 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 GLO1Q04760 184 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 EGR4Q05215 589 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 NPTX1Q15818 432 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 DHRS7BQ6IAN0 325 aaPredicted RBP12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 PIGWQ7Z7B1 504 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 C11orf44Q8N8P7 122 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 ADPRHL1Q8NDY3 354 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 CPEB3Q8NE35 698 aaKnown RBP12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 OR4S1Q8NGB4 309 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 DACT3Q96B18 629 aaPredicted RBP12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 PTDSS2Q9BVG9 487 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 PCDHAC1Q9H158 963 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 DCAF16Q9NXF7 216 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 ADA2Q9NZK5 511 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 SLC7A7Q9UM01 511 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 RCE1Q9Y256 329 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 U3KQK5 164 aa12.32□□□□□ -0.44
CTHRC1-201ENST00000330295 IGKV1D-42A0A075B6H8 117 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 LOC102725191A0A1B0GVB3 256 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 M0R082 166 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 CXCR6O00574 342 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 TPST2O60704 377 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 OR5F1O95221 314 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 IGHV1-46P01743 117 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 THRBP10828 461 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 CLDN17P56750 224 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 ERVS71-1P61550 626 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 SELENOWP63302 87 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 MXRA7P84157 204 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 HNRNPA0Q13151 305 aaKnown RBP12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 MOGQ16653 247 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 FKBP9P1Q75LS8 142 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 UEVLDQ8IX04 471 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 ZNF417Q8TAU3 575 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 RAB40AQ8WXH6 277 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 C11orf40Q8WZ69 217 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 FAM162AQ96A26 154 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 SLC41A3Q96GZ6 507 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 ZNF587Q96SQ5 575 aaPredicted RBP12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 EGLN1Q9GZT9 426 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 TAGLN3Q9UI15 199 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 RPS6KA6Q9UK32 745 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 LRCH1Q9Y2L9 728 aa12.31□□□□□ -0.44
CTHRC1-201ENST00000330295 HTR3EA5X5Y0 456 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 NME4O00746 187 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 SPRY3O43610 288 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 ZNF682O95780 498 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 IFNW1P05000 195 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 CBLP22681 906 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 AHCYP23526 432 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 RBM34P42696 430 aaKnown RBP12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 IER3P46695 156 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 GSK3BP49841 420 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 RAB1AP62820 205 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 ST3GAL3Q11203 375 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 RAB39AQ14964 217 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 C16orf89Q6UX73 402 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 CYP4Z1Q86W10 505 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 LRRC28Q86X40 367 aaPredicted RBP12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 RBM45Q8IUH3 476 aaKnown RBP12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 ZNF584Q8IVC4 421 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 ZNF519Q8TB69 540 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 GEMIN6Q8WXD5 167 aaKnown RBP12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 CFHR4Q92496 578 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 WFDC6Q9BQY6 131 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 SSBP3Q9BWW4 388 aaPredicted RBP12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 B3GAT2Q9NPZ5 323 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 NANSQ9NR45 359 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 MRPL39Q9NYK5 338 aaKnown RBP12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 ZNF224Q9NZL3 707 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 RIMS3Q9UJD0 308 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 FBXL3Q9UKT7 428 aa12.3□□□□□ -0.44
CTHRC1-201ENST00000330295 ZNF726A6NNF4 738 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 MGRN1O60291 552 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 FZD7O75084 574 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 FAM107AO95990 144 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 LCKP06239 509 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 UMPSP11172 480 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 PUDPQ08623 228 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 CDK5R2Q13319 367 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 IFI44LQ53G44 452 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 SAMD4BQ5PRF9 694 aaKnown RBP12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 C8orf82Q6P1X6 216 aaPredicted RBP12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 LINC00114Q6XXX2 140 aa12.29□□□□□ -0.44
CTHRC1-201ENST00000330295 ZNF813Q6ZN06 617 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms