RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 EFNA3P52797 238 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 GLO1Q04760 184 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 OR6M1Q8NGM8 313 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 OR52N5Q8NH56 324 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 ZNF587Q96SQ5 575 aaPredicted RBP13.79□□□□□ -0.2
BRCC3-201ENST00000330045 SLC25A21Q9BQT8 299 aaPredicted RBP13.79□□□□□ -0.2
BRCC3-201ENST00000330045 WWTR1Q9GZV5 400 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 MFFQ9GZY8 342 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 COA3Q9Y2R0 106 aaPredicted RBP13.79□□□□□ -0.2
BRCC3-201ENST00000330045 COL5A1P20908 1838 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-201ENST00000330045 WDFY3Q8IZQ1 3526 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 DCDC2BA2VCK2 349 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 M0QYG6 137 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 MPZL1O95297 269 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 IGHMP01871 453 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 NME1P15531 152 aaKnown RBP13.78□□□□□ -0.2
BRCC3-201ENST00000330045 RPA2P15927 270 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 ABCD3P28288 659 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 CRABP1P29762 137 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 NSDHLQ15738 373 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 HYAL4Q2M3T9 481 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 TUSC1Q2TAM9 212 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 PRAMEF17Q5VTA0 474 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 C12orf45Q8N5I9 185 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-201ENST00000330045 ZNF454Q8N9F8 522 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 FAM174AQ8TBP5 190 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 DAZLQ92904 295 aaKnown RBP13.78□□□□□ -0.2
BRCC3-201ENST00000330045 ZDHHC12Q96GR4 267 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 OR11A1Q9GZK7 315 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 SCPEP1Q9HB40 452 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 HHLA2Q9UM44 414 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 PCDH15Q96QU1 1955 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 RFPL4AA6NLU0 287 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 RFPL4AL1F8VTS6 287 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 H3BMH7 237 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 AQP8O94778 261 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 AMY2AP04746 511 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 CD37P11049 281 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 BCKDHBP21953 392 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 DNASE1L1P49184 302 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 PNLIPRP2P54317 469 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 VWA2Q5GFL6 755 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 ZNF660Q6AZW8 331 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-201ENST00000330045 SLC29A4Q7RTT9 530 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 GRINAQ7Z429 371 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 TMED4Q7Z7H5 227 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 CDH26Q8IXH8 852 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 GALNT16Q8N428 558 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 DEFB123Q8N688 67 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 OR51A2Q8NGJ7 313 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 OR13C3Q8NGS6 347 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 GPR119Q8TDV5 335 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 MVB12AQ96EY5 273 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 CMKLR1Q99788 373 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 TINAGL1Q9GZM7 467 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-201ENST00000330045 SLCO5A1Q9H2Y9 848 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 COPS7AQ9UBW8 275 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 EMC9Q9Y3B6 208 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 R4GMQ9 66 aa13.78□□□□□ -0.2
BRCC3-201ENST00000330045 CPAMD8Q8IZJ3 1885 aa13.77□□□□□ -0.2
BRCC3-201ENST00000330045 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 MEGF11A6BM72 1044 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 AHSA1O95433 338 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 CYB5AP00167 134 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 STARD6P59095 220 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 LRFN4Q6PJG9 635 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 ADGRE4PQ86SQ3 457 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 PRSS58Q8IYP2 241 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 JAGN1Q8N5M9 183 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 OR6K3Q8NGY3 331 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 ZMAT3Q9HA38 289 aaKnown RBP13.77□□□□□ -0.21
BRCC3-201ENST00000330045 MYEF2Q9P2K5 600 aaKnown RBP13.77□□□□□ -0.21
BRCC3-201ENST00000330045 PCNX3Q9H6A9 2034 aa13.77□□□□□ -0.21
BRCC3-201ENST00000330045 A8MXK9 166 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 KRBOX1C9JBD0 128 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 DOK2O60496 412 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 SDC3O75056 442 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 SRSF10O75494 262 aaKnown RBP13.76□□□□□ -0.21
BRCC3-201ENST00000330045 HLA-DOBP13765 273 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 SPOCK1Q08629 439 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 PMPCAQ10713 525 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 DEFB133Q30KQ1 61 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 SLC51BQ86UW2 128 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 PDZD9Q8IXQ8 264 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 KDM8Q8N371 416 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 STK35Q8TDR2 534 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF736B4DX44 427 aaPredicted RBP13.76□□□□□ -0.21
BRCC3-201ENST00000330045 OR2T1O43869 369 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 FADS1O60427 444 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 ALOX12BO75342 701 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 MPGP29372 298 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 SLC26A5P58743 744 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 LY6G6FQ5SQ64 297 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 CLVS2Q5SYC1 327 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 OVCH2Q7RTZ1 564 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 C17orf82Q86X59 251 aaPredicted RBP13.76□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF248Q8NDW4 579 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 OR5M9Q8NGP3 310 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 OR1N1Q8NGS0 311 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 DPYSL5Q9BPU6 564 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms