RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 M0R135 149 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 SNRPBP14678 240 aaKnown RBP10.36□□□□□ -0.75
COL4A5-201ENST00000328300 SLC17A1Q14916 467 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 OR1C1Q15619 314 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 DEFB109BQ30KR1 87 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 APOOLQ6UXV4 268 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF799Q96GE5 643 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 FOXN4Q96NZ1 517 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 IL20Q9NYY1 176 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 NDRG3Q9UGV2 375 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 IGHV5-51A0A0C4DH38 117 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CRYAAP02489 173 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 SRD5A2P31213 254 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 RFX2P48378 723 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 C9orf135Q5VTT2 229 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 KIRREL2Q6UWL6 708 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 GLIPR1L1Q6UWM5 242 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 GPR155Q7Z3F1 870 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 SNX18Q96RF0 628 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 PLEKHA3Q9HB20 300 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ASF1BQ9NVP2 202 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 TRIM64BA6NI03 449 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 B4E171 279 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ARPC5O15511 151 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CXCL13O43927 109 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF728P0DKX0 622 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 GIFP27352 417 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 TSPAN7P41732 249 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CLDN6P56747 220 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ZXDAP98168 799 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 TRIP6Q15654 476 aaKnown RBP10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ACSM5Q6NUN0 579 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF529Q6P280 563 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CFAP77Q6ZQR2 320 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ASB13Q8WXK3 278 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF681Q96N22 645 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 OPALINQ96PE5 141 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 HRH3Q9Y5N1 445 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CAV2P51636 162 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 SQSTM1Q13501 440 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 BCL2A1Q16548 175 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 TMEM211Q6ICI0 200 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF687Q8N1G0 1237 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 TMEM68Q96MH6 324 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CTSFQ9UBX1 484 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 LSM5Q9Y4Y9 91 aaKnown RBP10.36□□□□□ -0.75
COL4A5-201ENST00000328300 GABARAPH6UMI1 98 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 SPDEFO95238 335 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 IFNA17P01571 189 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 ABCD3P28288 659 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 CDK5R1Q15078 307 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 ELFN2Q5R3F8 820 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 FOXJ3Q9UPW0 622 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 CTDSP2O14595 271 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 FOLR1P15328 257 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 HLA-DMAP28067 261 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 LIPAP38571 399 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 DDOSTP39656 456 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 LSRQ86X29 649 aaPredicted RBP10.35□□□□□ -0.75
COL4A5-201ENST00000328300 MFFQ9GZY8 342 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 A4GNTQ9UNA3 340 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 B9D1Q9UPM9 204 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 TRAV1-2A0A0B4J238 106 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 HLA-AP01891 365 aaKnown RBP10.35□□□□□ -0.75
COL4A5-201ENST00000328300 PTPN6P29350 595 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 THBS4P35443 961 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 SCAND1P57086 179 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 OR2Y1Q8NGV0 311 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF236Q9UL36 1845 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 A0A1B0GTL3 188 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 AIPO00170 330 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 NRG2O14511 850 aaPredicted RBP10.35□□□□□ -0.75
COL4A5-201ENST00000328300 MT-ND4P03905 459 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 F2RL1P55085 397 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 STARD6P59095 220 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 RAB35Q15286 201 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 GLYATL3Q5SZD4 288 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 STEAP1BQ6NZ63 245 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 C17orf47Q8NEP4 570 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 ANKRD9Q96BM1 317 aaPredicted RBP10.35□□□□□ -0.75
COL4A5-201ENST00000328300 FAM117AQ9C073 453 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 MMP25Q9NPA2 562 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 DNAJB12Q9NXW2 375 aaKnown RBP10.35□□□□□ -0.75
COL4A5-201ENST00000328300 OR14J1Q9UGF5 321 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 LTBP1Q14766 1721 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 PARP14Q460N5 1801 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 CD1EP15812 388 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 PMPCAQ10713 525 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 FUT7Q11130 342 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 LILRB4Q8NHJ6 448 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 TRIB1Q96RU8 372 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 HINT2Q9BX68 163 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 DEFB127Q9H1M4 99 aa10.35□□□□□ -0.75
COL4A5-201ENST00000328300 A0A1W2PQF6 199 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 C17orf112F2Z3M2 114 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ETV5P41161 510 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 TGM4P49221 684 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 ETV1P50549 477 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 OR8G1Q15617 311 aa10.34□□□□□ -0.75
COL4A5-201ENST00000328300 IDO2Q6ZQW0 420 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms