RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 C2orf72A6NCS6 295 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 H0YIG0 161 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 ERVH48-1M5A8F1 160 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 ZNF250P15622 560 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 PLA2G7Q13093 441 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 RIN1Q13671 783 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 ZNF626Q68DY1 528 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 ANKRD16Q6P6B7 361 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 TSLPQ969D9 159 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 CENPVL1A0A0U1RR11 272 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 SEC14L5O43304 696 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 ZGLP1P0C6A0 271 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 RRASP10301 218 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 PEA15Q15121 130 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 NKAIN2Q5VXU1 208 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 ADGRG3Q86Y34 549 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 C4orf45Q96LM5 186 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 EMC6Q9BV81 110 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 CHRNA9Q9UGM1 479 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 A0A1B0GTH9 108 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 FAM230AA0A1W2PPH8 454 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 HLA-DQB1P01920 261 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 PSMB6P28072 239 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 MAP2K6P52564 334 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 AKR1C2P52895 323 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 GABREP78334 506 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 AKR1C1Q04828 323 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 FAM74A1Q5RGS3 127 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 CORO6Q6QEF8 472 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 PGAP1Q75T13 922 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 NICN1Q9BSH3 213 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 NKX6-2Q9C056 277 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-201ENST00000323668 PCYT1BQ9Y5K3 369 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-201ENST00000323668 OTOL1A6NHN0 477 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-201ENST00000323668 IL33O95760 270 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 SLC2A1P11166 492 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 CPN1P15169 458 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 ZP3P21754 424 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 ZNF141Q15928 474 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 ARTNQ5T4W7 220 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 MUC20Q8N307 709 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-201ENST00000323668 SCGB1C1Q8TD33 95 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 NUDCD2Q8WVJ2 157 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 PRSS27Q9BQR3 290 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 SUSD2Q9UGT4 822 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 GREB1Q4ZG55 1949 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 CACNA1IQ9P0X4 2223 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 RFPL4AA6NLU0 287 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 RFPL4AL1F8VTS6 287 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 IFNA5P01569 189 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 RAB6AP20340 208 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 SCAND1P57086 179 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 SLC26A5P58743 744 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 KLF9Q13886 244 aaPredicted RBP13.35□□□□□ -0.27
TCOF1-201ENST00000323668 WDR38Q5JTN6 314 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 H3F3CQ6NXT2 135 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 ZAR1Q86SH2 424 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 LSMEM1Q8N8F7 131 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 OR1M1Q8NGA1 313 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 PPP1R1CQ8WVI7 109 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 FAM86C1Q9NVL1 165 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 ZNF529Q6P280 563 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 GRAMD2AQ8IUY3 354 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 NPEPL1Q8NDH3 523 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 SPIN2AQ99865 258 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 SPIN2BQ9BPZ2 258 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 CCDC86Q9H6F5 360 aaKnown RBP13.35□□□□□ -0.27
TCOF1-201ENST00000323668 C1orf123Q9NWV4 160 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 ELF5Q9UKW6 265 aaPredicted RBP13.35□□□□□ -0.27
TCOF1-201ENST00000323668 R4GMQ9 66 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 SNU13P55769 128 aaKnown RBP13.35□□□□□ -0.27
TCOF1-201ENST00000323668 PSG6Q00889 435 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 EBPQ15125 230 aaKnown RBP13.35□□□□□ -0.27
TCOF1-201ENST00000323668 NHLRC1Q6VVB1 395 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 TMEM229BQ8NBD8 167 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 SULT4A1Q9BR01 284 aa13.35□□□□□ -0.27
TCOF1-201ENST00000323668 ZNF16P17020 682 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-201ENST00000323668 NME2P22392 152 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 HSF1Q00613 529 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 PLP2Q04941 152 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 IAH1Q2TAA2 248 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-201ENST00000323668 TINAGL1Q9GZM7 467 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-201ENST00000323668 LUZP4Q9P127 313 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 CSAG2Q9Y5P2 127 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 SPTBP11277 2137 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 AKR7A3O95154 331 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 FCGR2AP12318 317 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 CASRP41180 1078 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 PPT1P50897 306 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 KCNAB1Q14722 419 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 VWA2Q5GFL6 755 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 RAB11FIP2Q7L804 512 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 NAXDQ8IW45 347 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 BANF2Q9H503 90 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 ZNF629Q9UEG4 869 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-201ENST00000323668 MMP17Q9ULZ9 603 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 CAPZBP47756 277 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 C1orf53Q5VUE5 145 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 SLAMF6Q96DU3 332 aa13.34□□□□□ -0.27
TCOF1-201ENST00000323668 GPR137Q96N19 417 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms