RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NAT6Q93015 286 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 ELF4Q99607 663 aaPredicted RBP15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 AMBRA1Q9C0C7 1298 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 CTDSP1Q9GZU7 261 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 IGHEP01854 428 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 CLDN20P56880 219 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 COX20Q5RI15 118 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 AGBL4Q5VU57 503 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 TMEM88Q6PEY1 159 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 LIPHQ8WWY8 451 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 UBQLN3Q9H347 655 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 DHRS9Q9BPW9 319 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 TEAD1P28347 426 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 SMAD2Q15796 467 aaKnown RBP15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 SLC35G1Q2M3R5 365 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 DOK3Q7L591 496 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 AAED1Q7RTV5 226 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 PGBD5Q8N414 524 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 EMP3P54852 163 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 TMEM183BQ1AE95 376 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 RTL10Q7L3V2 364 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 ZNF680Q8NEM1 530 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 MED18Q9BUE0 208 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 TAAR2Q9P1P5 351 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 ZNF787Q6DD87 383 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 HTR3DQ70Z44 454 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 CDCA4Q9BXL8 241 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 UBE2IP63279 158 aaKnown RBP15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 CCDC74BQ96LY2 380 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 ASH2LQ9UBL3 628 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 SCGB1C2P0DMR2 95 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 FKBP2P26885 142 aaKnown RBP15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 PPP1R3BQ86XI6 285 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 STACQ99469 402 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 SPNS1Q9H2V7 528 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 ZNF354AO60765 605 aaPredicted RBP15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 OTUD1Q5VV17 481 aaPredicted RBP15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 CIB3Q96Q77 187 aaPredicted RBP15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 POLR2AP24928 1970 aaKnown RBP15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 CRYBG1Q9Y4K1 1723 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 TCAPO15273 167 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 DOK2O60496 412 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 ALOX5APP20292 161 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 FCGR2CP31995 323 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 EPHA5P54756 1037 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 KRTDAPP60985 99 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 PPP1CBP62140 327 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 LAMP3Q9UQV4 416 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 HS3ST1O14792 307 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 RPL12P30050 165 aaKnown RBP15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 RAB7AP51149 207 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 DEFB133Q30KQ1 61 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 TMEM104Q8NE00 496 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 LCORQ96JN0 433 aaPredicted RBP15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 C1QTNF3Q9BXJ4 246 aa15.49■□□□□ 0.07
SMCHD1-201ENST00000320876 RACK1P63244 317 aaKnown RBP15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 TMED6Q8WW62 240 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 RASD2Q96D21 266 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 GABARAPL1Q9H0R8 117 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 RAB18Q9NP72 206 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 ACTL7AQ9Y615 435 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 AMTP48728 403 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 FXNQ16595 210 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 DGAT2L6Q6ZPD8 337 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 TCEAL8Q8IYN2 117 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 OR5AP2Q8NGF4 316 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 PFN4Q8NHR9 129 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 UTP23Q9BRU9 249 aaKnown RBP15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 IFT22Q9H7X7 185 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 ABCD4O14678 606 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 HLA-FP30511 346 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 C9orf135Q5VTT2 229 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 NCR3LG1Q68D85 454 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 CPEB2Q7Z5Q1 589 aaKnown RBP15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 CLEC14AQ86T13 490 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 TTC9BQ8N6N2 239 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 ZIC5Q96T25 663 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 CDCA3Q99618 268 aaPredicted RBP15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 TMED7-TICAM2A0A0A6YYA0 188 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 SLC5A10A0PJK1 596 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 EDDM3BP56851 147 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 EXOSC2Q13868 293 aaKnown RBP15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 COTL1Q14019 142 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 ZBTB37Q5TC79 503 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 PET117Q6UWS5 81 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 OR52I2Q8NH67 350 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 TECTBQ96PL2 329 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 ZDHHC11Q9H8X9 412 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 TMED7Q9Y3B3 224 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 EDN3P14138 238 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 GPR12P47775 334 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 CTSCP53634 463 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 CLDN2P57739 230 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 COL9A2Q14055 689 aaPredicted RBP15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 HES1Q14469 280 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 DLL4Q9NR61 685 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 ATXN1LP0C7T5 689 aaKnown RBP15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 ARNTP27540 789 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 TMEM97Q5BJF2 176 aa15.48■□□□□ 0.07
SMCHD1-201ENST00000320876 PRSS45Q7RTY3 260 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms