RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SLC18B1Q6NT16 456 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF774Q6NX45 483 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 ANKRD16Q6P6B7 361 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF322Q6U7Q0 402 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 C22orf34Q6ZV56 151 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 BHLHA15Q7RTS1 189 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 IPCEF1Q8WWN9 437 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 MS4A3Q96HJ5 214 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 C4orf36Q96KX1 117 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 CCNB1IP1Q9NPC3 277 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 DIMT1Q9UNQ2 313 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 SNX5Q9Y5X3 404 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 UBR5O95071 2799 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF670-ZNF695F2Z2N8 137 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 TMCC2O75069 709 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 LCKP06239 509 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 LIMS3P0CW19 117 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 LIMS4P0CW20 117 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 PIPP12273 146 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 COX5AP20674 150 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 DCKP27707 260 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 CCKARP32238 428 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 UBE2NP61088 152 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 KCTD21Q4G0X4 260 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 SPARTQ8N0X7 666 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 ZFP41Q8N8Y5 198 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 OR5M11Q96RB7 305 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 ACTR6Q9GZN1 396 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 PIGMQ9H3S5 423 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF696Q9H7X3 374 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 MARCH7Q9H992 704 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 ACOXLQ9NUZ1 547 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 CHCHD3Q9NX63 227 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 SLCO1C1Q9NYB5 712 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 FBXL3Q9UKT7 428 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 GTF2A1LQ9UNN4 478 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 GRIP1Q9Y3R0 1128 aa13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 NCOA6Q14686 2063 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-202ENST00000318007 MAGEA13PA6NCF6 341 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 H3BSH0 61 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 IGHA1P01876 353 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 HRGP04196 525 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 OR2T7P0C7T2 308 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 ALOX5APP20292 161 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 PSMB10P40306 273 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 GABARAPL2P60520 117 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 RAB1AP62820 205 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 EMX1Q04741 257 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 AQP6Q13520 282 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 FOXL2NBQ6ZUU3 175 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 PRSS48Q7RTY5 328 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 OR10S1Q8NGN2 331 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 OR2T27Q8NH04 317 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 ST7LQ8TDW4 575 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 SPRYD4Q8WW59 207 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 BCL2L2Q92843 193 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 SLAMF6Q96DU3 332 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 KCNN2Q9H2S1 579 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 FGF20Q9NP95 211 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 MRPS18AQ9NVS2 196 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 TENM4Q6N022 2769 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 CELA3BP08861 270 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 DBHP09172 617 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 RNF224P0DH78 156 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 SMIM18P0DKX4 95 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 SLC2A1P11166 492 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 GTF2A1P52655 376 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 PSG4Q00888 419 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 TMED1Q13445 227 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 ODF4Q2M2E3 257 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 XAF1Q6GPH4 301 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 ZNF773Q6PK81 442 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 KCTD8Q6ZWB6 473 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 KRT77Q7Z794 578 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 MDP1Q86V88 176 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 MYPOPQ86VE0 399 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 YIPF3Q9GZM5 350 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 C1orf198Q9H425 327 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 ERGIC3Q9Y282 383 aa13.45□□□□□ -0.26
PDLIM5-202ENST00000318007 F5H5K5 113 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 CNOT4O95628 575 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 UGT2B10P36537 528 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 LSM6P62312 80 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 ACTC1P68032 377 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 ACTA1P68133 377 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 GALEQ14376 348 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 P2RY6Q15077 328 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 GSG1Q2KHT4 349 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 SLC36A2Q495M3 483 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 PABPC1L2AQ5JQF8 200 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 YIPF7Q8N8F6 280 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 HSD17B8Q92506 261 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 ZNF649Q9BS31 505 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 OR51B6Q9H340 312 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 RTTNQ86VV8 2226 aa13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 USP9XQ93008 2570 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-202ENST00000318007 SGCEO43556 437 aa13.43□□□□□ -0.26
PDLIM5-202ENST00000318007 CST2P09228 141 aa13.43□□□□□ -0.26
PDLIM5-202ENST00000318007 APEX1P27695 318 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-202ENST00000318007 IDH3GP51553 393 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms