RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 RETREG3Q86VR2 466 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 EDARADDQ8WWZ3 215 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 PROCRQ9UNN8 238 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 WASHC3Q9Y3C0 194 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 MKRN2OSH3BPM6 223 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 CACNG3O60359 315 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 CSF2RAP15509 400 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 COX5AP20674 150 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 FGF7P21781 194 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 INHBCP55103 352 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 RNF39Q9H2S5 420 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 OR52D1Q9H346 318 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 MN1Q10571 1320 aaPredicted RBP12.14□□□□□ -0.47
AFF3-201ENST00000317233 ABCA9Q8IUA7 1624 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 LOC100289279A0A1B0GTE1 492 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 E5RGE8 158 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 WDR1O75083 606 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 DUS4LO95620 317 aaKnown RBP12.14□□□□□ -0.47
AFF3-201ENST00000317233 SPI1P17947 270 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 PPP1CCP36873 323 aaKnown RBP12.14□□□□□ -0.47
AFF3-201ENST00000317233 RGNQ15493 299 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 TECRLQ5HYJ1 363 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 YRDCQ86U90 279 aaKnown RBP12.14□□□□□ -0.47
AFF3-201ENST00000317233 KCNK15Q9H427 330 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 DMRT3Q9NQL9 472 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 NME2P1O60361 137 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 PRSS56P0CW18 603 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 ABCA7Q8IZY2 2146 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 PARD6AQ9NPB6 346 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 GDE1Q9NZC3 331 aa12.14□□□□□ -0.47
AFF3-201ENST00000317233 GPR31O00270 319 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 OR2T7P0C7T2 308 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 LAMP1P11279 417 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 NPY4RP50391 375 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 CEACAM7Q14002 265 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ZNF385BQ569K4 471 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 TMEM268Q5VZI3 342 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ZNF788Q6ZQV5 615 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 LINC00469Q8N7U9 141 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 OR2I1PQ8NGU4 316 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ERGIC1Q969X5 290 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 FAM131CQ96AQ9 280 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 EDEM2Q9BV94 578 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 TRAPPC4Q9Y296 219 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 TRGV10A0A0A0MS01 117 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 KLF11O14901 512 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 SYNGR2O43760 224 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 FKBP2P26885 142 aaKnown RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 IZUMO4Q1ZYL8 232 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 SIAH1Q8IUQ4 282 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 PARP16Q8N5Y8 322 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ISG20Q96AZ6 181 aaKnown RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 TMEM231Q9H6L2 316 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ANKRD10Q9NXR5 420 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 GABRPO00591 440 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 SLC6A12P48065 614 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 MS4A2Q01362 244 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 PPRC1Q5VV67 1664 aaKnown RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 VWDEQ8N2E2 1590 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 FRS3O43559 492 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 NFATC3Q12968 1075 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 WDR74Q6RFH5 385 aaPredicted RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 SMIM7Q9BQ49 75 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ST6GALNAC4Q9H4F1 302 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 SLC5A6Q9Y289 635 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 DIP2AQ14689 1571 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ZNF140P52738 457 aaPredicted RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 GLYATL3Q5SZD4 288 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 STUMQ69YW2 141 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 LETMD1Q6P1Q0 360 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ZFP62Q8NB50 900 aaPredicted RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 IP6K3Q96PC2 410 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 SLC22A12Q96S37 553 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 PARP12Q9H0J9 701 aaKnown RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 TAAR2Q9P1P5 351 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 DUOX1Q9NRD9 1551 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 SOX18P35713 384 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 RPL24P83731 157 aaKnown RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 C19orf57Q0VDD7 668 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 CLN3Q13286 438 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 PDZD3Q86UT5 571 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 KLHDC8BQ8IXV7 354 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 EXD3Q8N9H8 876 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ZFAND2BQ8WV99 257 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 GALMQ96C23 342 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 ST8SIA3O43173 380 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 GPRIN2O60269 458 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 F11P03951 625 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 PDGFAP04085 211 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 PRSS1P07477 247 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 MNX1P50219 401 aaPredicted RBP12.13□□□□□ -0.47
AFF3-201ENST00000317233 CDK5R2Q13319 367 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 TMEM207Q6UWW9 146 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 SLC15A4Q8N697 577 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 OR1N1Q8NGS0 311 aa12.13□□□□□ -0.47
AFF3-201ENST00000317233 KHSRPQ92945 711 aaKnown RBP eCLIP12.13□□□□□ -0.47
AFF3-201ENST00000317233 ESRP2Q9H6T0 727 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms