RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ZBTB46Q86UZ6 589 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 OR2T33Q8NG76 320 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 MAP6Q96JE9 813 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 DOK1Q99704 481 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 MMADHCQ9H3L0 296 aaPredicted RBP10.34□□□□□ -0.75
SCFD1-201ENST00000311943 CXorf56Q9H5V9 222 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 TMEFF2Q9UIK5 374 aaPredicted RBP10.34□□□□□ -0.75
SCFD1-201ENST00000311943 MTORP42345 2549 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 DOK2O60496 412 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 LCKP06239 509 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 ADRA2AP08913 450 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 ZNF23P17027 643 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 HCCSP53701 268 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 UCP2P55851 309 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 TEKQ02763 1124 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 LINC01590Q5TEZ4 76 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 ZNF544Q6NX49 715 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 TMEM53Q6P2H8 277 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 PLBD1Q6P4A8 553 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 FAHD1Q6P587 224 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 CD300LDQ6UXZ3 194 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 CCDC36Q8IYA8 594 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 NUP37Q8NFH4 326 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 UBE2FQ969M7 185 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 AMELYQ99218 206 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 TMUB1Q9BVT8 246 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 OR2J1Q9GZK6 312 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 OR51V1Q9H2C8 321 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 CDH20Q9HBT6 801 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 HINT3Q9NQE9 182 aaKnown RBP10.34□□□□□ -0.75
SCFD1-201ENST00000311943 PLEK2Q9NYT0 353 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 STX18Q9P2W9 335 aaKnown RBP10.34□□□□□ -0.75
SCFD1-201ENST00000311943 TIMM10BQ9Y5J6 103 aa10.34□□□□□ -0.75
SCFD1-201ENST00000311943 CUBNO60494 3623 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 IGHV4-30-2A0A087WSY4 118 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 IQCMA0A1B0GVH7 501 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 G3V2T6 193 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 SYNGR3O43761 229 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 CIB2O75838 187 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 RENP00797 406 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 OSMP13725 252 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 SPI1P17947 270 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 FASP25445 335 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 HTR5AP47898 357 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 CDK5Q00535 292 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 C3orf36Q3SXR2 165 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 NRN1LQ496H8 165 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 PROKR2Q8NFJ6 384 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 OR1J1Q8NGS3 322 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 ABHD4Q8TB40 342 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 TEX47Q8TBZ9 253 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 DUS3LQ96G46 650 aaKnown RBP10.33□□□□□ -0.76
SCFD1-201ENST00000311943 CIB1Q99828 191 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 NMNAT2Q9BZQ4 307 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 PLK3Q9H4B4 646 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 PNRC2Q9NPJ4 139 aaKnown RBP10.33□□□□□ -0.76
SCFD1-201ENST00000311943 DLL4Q9NR61 685 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 AASSQ9UDR5 926 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 GRIP1Q9Y3R0 1128 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 RNF223E7ERA6 249 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 SGCEO43556 437 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 DEAF1O75398 565 aaPredicted RBP10.33□□□□□ -0.76
SCFD1-201ENST00000311943 CD99P14209 185 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 APLNRP35414 380 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 PLP2Q04941 152 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 PTGES3Q15185 160 aaKnown RBP10.33□□□□□ -0.76
SCFD1-201ENST00000311943 CLEC12BQ2HXU8 276 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 SLC18B1Q6NT16 456 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 LINC00471Q8N535 108 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 OR6K6Q8NGW6 343 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 OR5K1Q8NHB7 308 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 SLC25A40Q8TBP6 338 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 MRPL24Q96A35 216 aaKnown RBP10.33□□□□□ -0.76
SCFD1-201ENST00000311943 ZMYND19Q96E35 227 aaPredicted RBP10.33□□□□□ -0.76
SCFD1-201ENST00000311943 TTTY10Q9BZA0 68 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 GRIP2Q9C0E4 1043 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 KCNN2Q9H2S1 579 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 TREM2Q9NZC2 230 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 POLR1DQ9Y2S0 133 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 STARD10Q9Y365 291 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 FKBP7Q9Y680 259 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 COMMD3-BMI1R4GMX3 469 aa10.33□□□□□ -0.76
SCFD1-201ENST00000311943 CSPG4Q6UVK1 2322 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 SURF4O15260 269 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 PRKYO43930 277 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 LILRA1O75019 489 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 GSTM3P21266 225 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 CRABP1P29762 137 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 GLRXP35754 106 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 MAGEB1P43366 347 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 GDI2P50395 445 aaKnown RBP10.32□□□□□ -0.76
SCFD1-201ENST00000311943 GALK2Q01415 458 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 HLXQ14774 488 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-201ENST00000311943 RAB35Q15286 201 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 TBC1D28Q2M2D7 210 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 SSX8Q7RTT4 187 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 CPOQ8IVL8 374 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 OR4F15Q8NGB8 312 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 IPCEF1Q8WWN9 437 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-201ENST00000311943 RACGAP1Q9H0H5 632 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms