RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 EIF1AYO14602 144 aaKnown RBP10.54□□□□□ -0.72
TRIM40-205ENST00000307859 TMCC2O75069 709 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 GLSO94925 669 aaPredicted RBP10.54□□□□□ -0.72
TRIM40-205ENST00000307859 SP1P08047 785 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 POU3F2P20265 443 aaPredicted RBP10.54□□□□□ -0.72
TRIM40-205ENST00000307859 ENPP1P22413 925 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 MAPK3P27361 379 aaPredicted RBP10.54□□□□□ -0.72
TRIM40-205ENST00000307859 SUCLG1P53597 346 aaKnown RBP10.54□□□□□ -0.72
TRIM40-205ENST00000307859 CLDN15P56746 228 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 CARD18P57730 90 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 MFAP5Q13361 173 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 RTP5Q14D33 572 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 OXA1LQ15070 435 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 HYAL4Q2M3T9 481 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 C10orf128Q5T292 105 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 CARD17Q5XLA6 110 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 STEAP3Q658P3 488 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 ABLIM2Q6H8Q1 611 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 OR7E24Q6IFN5 339 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 LRFN4Q6PJG9 635 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 FOXL2NBQ6ZUU3 175 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 LINC00346Q8IVM7 164 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 TMEM123Q8N131 208 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 ZIC4Q8N9L1 334 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 MINDY2Q8NBR6 621 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 IL17RDQ8NFM7 739 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 OR10H5Q8NGA6 315 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 RNF133Q8WVZ7 376 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 THRSPQ92748 146 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF385AQ96PM9 386 aaKnown RBP10.54□□□□□ -0.72
TRIM40-205ENST00000307859 SOSTQ9BQB4 213 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 TTTY12Q9BZ98 90 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 SRRQ9GZT4 340 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 ABCB10Q9NRK6 738 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 GLTPQ9NZD2 209 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 COMMD3Q9UBI1 195 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 ARHGAP21Q5T5U3 1957 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 TRBV5-7A0A0A0MS05 114 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 A0A1W2PPK0 400 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 A0A1W2PPL8 197 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 ACOD1A6NK06 481 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 NOTOA8MTQ0 251 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 GPR171O14626 319 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 HPGDSO60760 199 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 SLC19A2O60779 497 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 PNPP00491 289 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 QDPRP09417 244 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 SRMP19623 302 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 CSNK1A1P48729 337 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 STARP49675 285 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 MFGE8Q08431 387 aaPredicted RBP10.53□□□□□ -0.72
TRIM40-205ENST00000307859 SRSF6Q13247 344 aaKnown RBP10.53□□□□□ -0.72
TRIM40-205ENST00000307859 IDNKQ5T6J7 187 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 SLC25A25Q6KCM7 469 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF544Q6NX49 715 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 METAP1DQ6UB28 335 aaPredicted RBP10.53□□□□□ -0.72
TRIM40-205ENST00000307859 CATSPERDQ86XM0 798 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF676Q8N7Q3 588 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 OR10D3Q8NH80 312 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 GPR148Q8TDV2 347 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 INTS12Q96CB8 462 aaKnown RBP10.53□□□□□ -0.72
TRIM40-205ENST00000307859 SCMH1Q96GD3 660 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 DIRAS2Q96HU8 199 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 DAPK2Q9UIK4 370 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 FOXD3Q9UJU5 478 aaPredicted RBP10.53□□□□□ -0.72
TRIM40-205ENST00000307859 ADAM30Q9UKF2 790 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 RCE1Q9Y256 329 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 LHFPL6Q9Y693 200 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 R4GMQ9 66 aa10.53□□□□□ -0.72
TRIM40-205ENST00000307859 TNRC6AQ8NDV7 1962 aaKnown RBP10.53□□□□□ -0.72
TRIM40-205ENST00000307859 FABP12A6NFH5 140 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 ZNF716A6NP11 495 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 NKX2-8O15522 239 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 CXCL13O43927 109 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 TMEM127O75204 238 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 RAF1P04049 648 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 EPXP11678 715 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 WT1P19544 449 aaPredicted RBP10.52□□□□□ -0.73
TRIM40-205ENST00000307859 PTBP1P26599 531 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRIM40-205ENST00000307859 APEX1P27695 318 aaKnown RBP10.52□□□□□ -0.73
TRIM40-205ENST00000307859 DCTDP32321 178 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 EVX1P49640 407 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 CXADRP78310 365 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 SLC25A35Q3KQZ1 300 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 CNIH2Q6PI25 160 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 XKRXQ6PP77 449 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 CORO6Q6QEF8 472 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 SPATC1Q76KD6 591 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 GALNTL5Q7Z4T8 443 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 UBQLNLQ8IYU4 475 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 TMEM251Q8N6I4 163 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 HAS2Q92819 552 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 CPNE4Q96A23 557 aaPredicted RBP10.52□□□□□ -0.73
TRIM40-205ENST00000307859 PNPLA2Q96AD5 504 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 SLAMF6Q96DU3 332 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 COX4I2Q96KJ9 171 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 C1orf198Q9H425 327 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 ZNF552Q9H707 407 aaPredicted RBP10.52□□□□□ -0.73
TRIM40-205ENST00000307859 B3GAT2Q9NPZ5 323 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 POLE4Q9NR33 117 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms