RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 EDNRAP25101 427 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ALKBH1Q13686 389 aaKnown RBP11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 DGUOKQ16854 277 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 NRN1LQ496H8 165 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 FAM27BQ5VT28 67 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ARL9Q6T311 187 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 RPTNQ6XPR3 784 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 DCXRQ7Z4W1 244 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 TUSC5Q8IXB3 177 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 GPR137CQ8N3F9 429 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ABHD4Q8TB40 342 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 PHYHIPQ92561 330 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 NABP1Q96AH0 204 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ZNF775Q96BV0 537 aaPredicted RBP11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 KCTD7Q96MP8 289 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 KCNN2Q9H2S1 579 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 C1orf198Q9H425 327 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 CXorf56Q9H5V9 222 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SEC61A2Q9H9S3 476 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ELOVL3Q9HB03 270 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 EXOSC4Q9NPD3 245 aaKnown RBP11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ASF1BQ9NVP2 202 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 CLCF1Q9UBD9 225 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 IKZF2Q9UKS7 526 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 GRIP1Q9Y3R0 1128 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 LHFPL6Q9Y693 200 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SPTA1P02549 2419 aa11.31□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SLC22A20A6NK97 555 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 GABRPO00591 440 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 RGS9O75916 674 aaPredicted RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 IL1AP01583 271 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 CDAP32320 146 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 OPRL1P41146 370 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 GDI2P50395 445 aaKnown RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 RIDAP52758 137 aaKnown RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 HIST1H3AP68431 136 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SLC3A1Q07837 685 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 HIST2H3PS2Q5TEC6 136 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 PAMR1Q6UXH9 720 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 UNQ9370/PRO34162Q6UXP9 181 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 HIST2H3AQ71DI3 136 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 KRT77Q7Z794 578 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 MCEMP1Q8IX19 187 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 OR2AJ1Q8NGZ0 328 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 OR2G2Q8NGZ5 317 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 MAP6Q96JE9 813 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 WACQ9BTA9 647 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 TMED9Q9BVK6 235 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 RBM24Q9BX46 236 aaKnown RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 TTTY10Q9BZA0 68 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SLCO5A1Q9H2Y9 848 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 RNF167Q9H6Y7 350 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 NIPAL2Q9H841 368 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 GPR35Q9HC97 309 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 CCDC59Q9P031 241 aaKnown RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 GDF2Q9UK05 429 aaPredicted RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ZNF281Q9Y2X9 895 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 OR4C45A6NMZ5 311 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 PSMD9O00233 223 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 GPR37O15354 613 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 LRRTM2O43300 516 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SRSF10O75494 262 aaKnown RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 GATBO75879 557 aaKnown RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 CLPXO76031 633 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 TGM6O95932 706 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 CTSSP25774 331 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 TGFBR1P36897 503 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 PSMB10P40306 273 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SERPINB10P48595 397 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 NANOS3P60323 173 aaKnown RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SF3B4Q15427 424 aaKnown RBP eCLIP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 YIF1BQ5BJH7 314 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 C22orf42Q6IC83 251 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ZNF544Q6NX49 715 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 LRRN1Q6UXK5 716 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ZNF627Q7L945 461 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 GMPPAQ96IJ6 420 aaPredicted RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 HDHD5Q9BXW7 423 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 NXF2Q9GZY0 626 aaKnown RBP11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 CALHM2Q9HA72 323 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 EMC7Q9NPA0 242 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 TMEM38BQ9NVV0 291 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 FRRS1LQ9P0K9 344 aa11.3□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 TMEM212A6NML5 194 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 MMP16P51512 607 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ENDOGQ14249 297 aaKnown RBP11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SGCAQ16586 387 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 ACSM3Q53FZ2 586 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 TSPO2Q5TGU0 170 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 OTPQ5XKR4 325 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SYT9Q86SS6 491 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 LINC00346Q8IVM7 164 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 OR10S1Q8NGN2 331 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 WNT2BQ93097 391 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 SLAMF6Q96DU3 332 aa11.29□□□□□ -0.6
SHANK2-AS3-201ENST00000307548 C4orf45Q96LM5 186 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms