RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 DANCRP0C864 163 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CLUP10909 449 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ZNF35P13682 527 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 NR4A1P22736 598 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 RAD52P43351 418 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ALDH3A2P51648 485 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SNRPD2P62316 118 aaKnown RBP9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 RAB35Q15286 201 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 KLHL12Q53G59 568 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ZNF362Q5T0B9 420 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 LCN1P1Q5VSP4 162 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 OTPQ5XKR4 325 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 RGS7BPQ6MZT1 257 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PLBD1Q6P4A8 553 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CORO6Q6QEF8 472 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CXXC5Q7LFL8 322 aaKnown RBP9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 LINC00346Q8IVM7 164 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 EME1Q96AY2 570 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 TRAF4Q9BUZ4 470 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GABARAPL3Q9BY60 117 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 NMNAT2Q9BZQ4 307 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 BCL2L14Q9BZR8 327 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 HDHD2Q9H0R4 259 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 OR51B6Q9H340 312 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 MED20Q9H944 212 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ELOVL3Q9HB03 270 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 USE1Q9NZ43 259 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ATPIF1Q9UII2 106 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 TMEFF2Q9UIK5 374 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 FBXO9Q9UK97 447 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 COMMD3-BMI1R4GMX3 469 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PMF1-BGLAPU3KQ54 211 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ARFGEF3Q5TH69 2177 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CHD3Q12873 2000 aaKnown RBP9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 OR6C6A6NF89 314 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 B9A039 149 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 RER1O15258 196 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PRODHO43272 600 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GLCEO94923 617 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ABHD16AO95870 558 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 TFP02787 698 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ALPLP05186 524 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SPARCP09486 303 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 OR4A8P0C604 315 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 FAM157BP0CG42 384 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PCSK6P29122 969 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 THBS4P35443 961 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GLRXP35754 106 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SERPINF1P36955 418 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ENTPD1P49961 510 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SELENOVP59797 346 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 HGFACQ04756 655 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 DBPQ10586 325 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 RCN1Q15293 331 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SLC35D3Q5M8T2 416 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ELFN2Q5R3F8 820 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SLX4IPQ5VYV7 408 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SLC18B1Q6NT16 456 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ZBTB49Q6ZSB9 765 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 VASH1Q7L8A9 365 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ERI1Q8IV48 349 aaKnown RBP9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CPOQ8IVL8 374 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CBR4Q8N4T8 237 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CPEB3Q8NE35 698 aaKnown RBP9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 OR6N2Q8NGY6 317 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PERPQ96FX8 193 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 POM121L2Q96KW2 1035 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 INTS14Q96SY0 518 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 DDOQ99489 341 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PITX2Q99697 317 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 FOXC2Q99958 501 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GRIP2Q9C0E4 1043 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PLK3Q9H4B4 646 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 HINT3Q9NQE9 182 aaKnown RBP9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 MRPL22Q9NWU5 206 aaKnown RBP9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 H2AFY2Q9P0M6 372 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GDF2Q9UK05 429 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 LHFPL6Q9Y693 200 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ABCA12Q86UK0 2595 aa9.5□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 H0YHG0 523 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SYNGR3O43761 229 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GPRIN2O60269 458 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ERCC1P07992 297 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ANPEPP15144 967 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GSTT1P30711 240 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CDKN1AP38936 164 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PTH2RP49190 550 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 UCP2P55851 309 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ATP5J2P56134 94 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CDC42P60953 191 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 NKX6-1P78426 367 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 EFNB3Q15768 340 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ADIPOQQ15848 244 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CCDC92Q53HC0 331 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 C12orf73Q69YU5 71 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 TMEM154Q6P9G4 183 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 LYPD4Q6UWN0 246 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SHFQ7M4L6 423 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GID4Q8IVV7 300 aa9.49□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 C1orf174Q8IYL3 243 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms