RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 OR52W1Q6IF63 320 aa14.51□□□□□ -0.09
USP42-201ENST00000306177 BRICD5Q6PL45 260 aa14.51□□□□□ -0.09
USP42-201ENST00000306177 CALHM3Q86XJ0 350 aa14.51□□□□□ -0.09
USP42-201ENST00000306177 FAM109AQ8N4B1 249 aa14.51□□□□□ -0.09
USP42-201ENST00000306177 BHLHE23Q8NDY6 225 aa14.51□□□□□ -0.09
USP42-201ENST00000306177 SEC22CQ9BRL7 303 aa14.51□□□□□ -0.09
USP42-201ENST00000306177 RTL8AQ9BWD3 113 aa14.51□□□□□ -0.09
USP42-201ENST00000306177 YBX2Q9Y2T7 364 aaKnown RBP14.51□□□□□ -0.09
USP42-201ENST00000306177 RGS11O94810 467 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 SELEP16581 610 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 PAN3Q58A45 887 aaKnown RBP14.5□□□□□ -0.09
USP42-201ENST00000306177 SLC22A25Q6T423 547 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 SMIM19Q96E16 107 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 LANCL2Q9NS86 450 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 COL4A5P29400 1685 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 GMDSO60547 372 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 TBXA2RP21731 343 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 EDDM3BP56851 147 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 ASAH1Q13510 395 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 ZNF74Q16587 644 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 ATPAF1Q5TC12 328 aaPredicted RBP14.5□□□□□ -0.09
USP42-201ENST00000306177 CORO6Q6QEF8 472 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 LGI3Q8N145 548 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 PLA2G2FQ9BZM2 168 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 PCED1AQ9H1Q7 454 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 POFUT1Q9H488 388 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 PLAC1Q9HBJ0 212 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 KIR2DS1A0A191URI9 304 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 OR6C65A6NJZ3 312 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 DEGS1O15121 323 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 KIR2DS4P43632 304 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 FAPQ12884 760 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 KIR2DS1Q14954 304 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 DPPA2Q7Z7J5 298 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 OPALINQ96PE5 141 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 FBXO8Q9NRD0 319 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 WSB2Q9NYS7 404 aaPredicted RBP14.5□□□□□ -0.09
USP42-201ENST00000306177 PRELID3BQ9Y3B1 194 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 DLEC1Q9Y238 1755 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 LRRC30A6NM36 301 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 AIPO00170 330 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 PRKNO60260 465 aaPredicted RBP14.5□□□□□ -0.09
USP42-201ENST00000306177 CLDN1O95832 211 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 GRPP07492 148 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 GUSBP08236 651 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 RNF4P78317 190 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 ZCCHC4Q9H5U6 513 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 ZNF385DQ9H6B1 395 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 SPACA1Q9HBV2 294 aa14.5□□□□□ -0.09
USP42-201ENST00000306177 SLC35B4Q969S0 331 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 KCNJ15Q99712 375 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 PRDM7Q9NQW5 492 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 M0R135 149 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 HBE1P02100 147 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 S100A11P31949 105 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 TLE4Q04727 773 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 CDK5R1Q15078 307 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 SLC51BQ86UW2 128 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 OR52I2Q8NH67 350 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 ZNF799Q96GE5 643 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 FGF20Q9NP95 211 aaPredicted RBP14.49□□□□□ -0.09
USP42-201ENST00000306177 SLC5A6Q9Y289 635 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 A0A087WZY1 265 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 hCG_1809904A0A1W2PP81 198 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 A0A1W2PPE2 198 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 A0A1W2PR64 198 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 A0A1W2PRV1 198 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 BCKDHBP21953 392 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 TTC9Q92623 222 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 DEFB127Q9H1M4 99 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.49□□□□□ -0.09
USP42-201ENST00000306177 DDOSTP39656 456 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 SUMO3P55854 103 aaPredicted RBP14.49□□□□□ -0.09
USP42-201ENST00000306177 AGERQ15109 404 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 KIRREL2Q6UWL6 708 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 FJX1Q86VR8 437 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 OR10K1Q8NGX5 313 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 DYNC2LI1Q8TCX1 351 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 CRISPLD2Q9H0B8 497 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 C19orf12Q9NSK7 152 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 MED29Q9NX70 200 aa14.49□□□□□ -0.09
USP42-201ENST00000306177 ZNF732B4DXR9 585 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 TRAPPC2P0DI81 140 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 TRAPPC2BP0DI82 140 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 APEHP13798 732 aaKnown RBP14.48□□□□□ -0.09
USP42-201ENST00000306177 S100A7P31151 101 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 ZNF266Q14584 549 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 SLC10A1Q14973 349 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 PHLDA2Q53GA4 152 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 RNF141Q8WVD5 230 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 C11orf40Q8WZ69 217 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 PLPP5Q8NEB5 264 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 TMEM43Q9BTV4 400 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 PPM1DO15297 605 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 ENSAO43768 121 aaKnown RBP14.48□□□□□ -0.09
USP42-201ENST00000306177 ARR3P36575 388 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 FABP5Q01469 135 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 HIPK2Q9H2X6 1198 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 R4GMQ9 66 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 FUCA1P04066 466 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms