RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 C3orf49Q96BT1 292 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 PARP12Q9H0J9 701 aaKnown RBP12.05□□□□□ -0.48
DDX54-201ENST00000306014 GAREM1Q9H706 876 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 PCYT1BQ9Y5K3 369 aaPredicted RBP12.05□□□□□ -0.48
DDX54-201ENST00000306014 FAM186AA6NE01 2351 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 SIP14410 1827 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 CCDC163A0A0D9SF12 145 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 PRSS37A4D1T9 235 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 ARPC3O15145 178 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 SERPINF1P36955 418 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 TAS2R46P59540 309 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 IL10RAQ13651 578 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 ZNF74Q16587 644 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 CDONQ4KMG0 1287 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 SMUG1Q53HV7 270 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 RAB11FIP2Q7L804 512 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 GRINAQ7Z429 371 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 ZAR1Q86SH2 424 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 ETFBKMTQ8IXQ9 262 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 LRRC18Q8N456 261 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 AKR7A3O95154 331 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 FCGR2AP12318 317 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 MGMTP16455 207 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 GPR137CQ8N3F9 429 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 CCDC74AQ96AQ1 378 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 MRGPRX1Q96LB2 322 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 CMTM3Q96MX0 182 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 FLRT3Q9NZU0 649 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 MTFP1Q9UDX5 166 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 SF3B6Q9Y3B4 125 aaKnown RBP12.05□□□□□ -0.48
DDX54-201ENST00000306014 A0A0G2JMZ2 1700 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 LRRC37A2A6NM11 1700 aa12.05□□□□□ -0.48
DDX54-201ENST00000306014 RALGAPA2Q2PPJ7 1873 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 MCRIP1C9JLW8 97 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 SLC17A2O00624 439 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 WDPCPO95876 746 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 IFNA5P01569 189 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ZP3P21754 424 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 PPICP45877 212 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 FUT5Q11128 374 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 CAMK2BQ13554 666 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ACTBL2Q562R1 376 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 VWA2Q5GFL6 755 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ZFP82Q8N141 532 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 HSD17B8Q92506 261 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 NICN1Q9BSH3 213 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 LHX9Q9NQ69 397 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ZNF629Q9UEG4 869 aaPredicted RBP12.04□□□□□ -0.48
DDX54-201ENST00000306014 NSA2O95478 260 aaKnown RBP12.04□□□□□ -0.48
DDX54-201ENST00000306014 RRASP10301 218 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 C19orf57Q0VDD7 668 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 PRTGQ2VWP7 1150 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 C14orf28Q4W4Y0 310 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 DMRTC1Q5HYR2 192 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 EXOSC6Q5RKV6 272 aaKnown RBP12.04□□□□□ -0.48
DDX54-201ENST00000306014 PWWP2BQ6NUJ5 590 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 TCTEX1D2Q8WW35 142 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ZNF681Q96N22 645 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 TBXA2RP21731 343 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 PSMB6P28072 239 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 AVPR2P30518 371 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 HRH1P35367 487 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 WDR38Q5JTN6 314 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ELFN2Q5R3F8 820 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 TMEM200AQ86VY9 491 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 C2CD4CQ8TF44 421 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 TCEAL3Q969E4 200 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 RSPRY1Q96DX4 576 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 LRRC3BQ96PB8 259 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 CCNL2Q96S94 520 aaPredicted RBP12.04□□□□□ -0.48
DDX54-201ENST00000306014 ABHD6Q9BV23 337 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 CCDC86Q9H6F5 360 aaKnown RBP12.04□□□□□ -0.48
DDX54-201ENST00000306014 MMP25Q9NPA2 562 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ZFP57Q9NU63 452 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 MED29Q9NX70 200 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 B9D1Q9UPM9 204 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 GREB1Q4ZG55 1949 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 C7orf66A4D0T2 115 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ZNF749O43361 778 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 TNFSF12O43508 249 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 C17orf67Q0P5P2 114 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 PRAMEF20Q5VT98 475 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 COMTD1Q86VU5 262 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ADGRG3Q86Y34 549 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 GRAMD2AQ8IUY3 354 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 ZNF695Q8IW36 515 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 FGF14Q92915 247 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 KCNJ15Q99712 375 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 MMACHCQ9Y4U1 282 aa12.04□□□□□ -0.48
DDX54-201ENST00000306014 GOLGB1Q14789 3259 aaKnown RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 TLCD2A6NGC4 264 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 OTOL1A6NHN0 477 aaPredicted RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 OGG1O15527 345 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 GNB3P16520 340 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 ZNF136P52737 540 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 SRSF5Q13243 272 aaKnown RBP12.03□□□□□ -0.48
DDX54-201ENST00000306014 ZNF626Q68DY1 528 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 BEND4Q6ZU67 534 aa12.03□□□□□ -0.48
DDX54-201ENST00000306014 H1FNTQ75WM6 255 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms