RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CCDC187A0A096LP49 1063 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 A0A0J9YW62 118 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 PINLYPA6NC86 204 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 LMX1BO60663 402 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 CD3GP09693 182 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 PRKAR1AP10644 381 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ANOS1P23352 680 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 DLSTP36957 453 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 EIF2B2P49770 351 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 CLDN20P56880 219 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 PHYHD1Q5SRE7 291 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ZNF57Q68EA5 555 aaPredicted RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 MTFR2Q6P444 385 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 UPRTQ96BW1 309 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 NKX3-1Q99801 234 aaPredicted RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 TEKT2Q9UIF3 430 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 DKKL1Q9UK85 242 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 CAMK2AQ9UQM7 478 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 TMA7Q9Y2S6 64 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 PHF3Q92576 2039 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 LOC400499M0QZD8 3231 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 A0A1W2PPL8 197 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 EIF1AYO14602 144 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 QDPRP09417 244 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 CALCBP10092 127 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ZNF17P17021 662 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 SLC6A1P30531 599 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 NR4A2P43354 598 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 EIF1AXP47813 144 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 CLDN17P56750 224 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 GPR85P60893 370 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 RNASE12Q5GAN4 147 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 HES3Q5TGS1 186 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 DEGS2Q6QHC5 323 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 CREB3L2Q70SY1 520 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 YRDCQ86U90 279 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 BIVMQ86UB2 503 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 TMPRSS12Q86WS5 348 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 OR6F1Q8NGZ6 308 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ENKURQ8TC29 256 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ADAMTS17Q8TE56 1095 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 TSEN15Q8WW01 171 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 GCDHQ92947 438 aaPredicted RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 SLAMF6Q96DU3 332 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ZNF385AQ96PM9 386 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 SRXN1Q9BYN0 137 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 SLITRK2Q9H156 845 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 CENPMQ9NSP4 180 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 FAM206AQ9NX38 181 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 NPAP1Q9NZP6 1156 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ZFHX4Q86UP3 3567 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 OTOGLQ3ZCN5 2332 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 TMEM269A0A1B0GVZ9 245 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 TNFSF11O14788 317 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 GALR2O43603 387 aaPredicted RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 P04436 131 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ISG15P05161 165 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ITGA5P08648 1049 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 TMIGD3P0DMS9 266 aaPredicted RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 IGFBP3P17936 291 aaPredicted RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 CFPP27918 469 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 PTH2RP49190 550 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 RAC1P63000 192 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 PLA1AQ53H76 456 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 THOC7Q6I9Y2 204 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 SPINK14Q6IE38 97 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 MZT2BQ6NZ67 158 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ZIC4Q8N9L1 334 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 THOC3Q96J01 351 aaKnown RBP5.81□□□□□ -1.48
USP47-201ENST00000305481 CDC6Q99741 560 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 MARVELD1Q9BSK0 173 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 GPR87Q9BY21 358 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 ABCG5Q9H222 651 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 AUNIPQ9H7T9 357 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 SEC61A2Q9H9S3 476 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 OR52A1Q9UKL2 312 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 FOXJ3Q9UPW0 622 aa5.81□□□□□ -1.48
USP47-201ENST00000305481 CTDSPLO15194 276 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 GSTZ1O43708 216 aaPredicted RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 TMEM127O75204 238 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 H2BFMP0C1H6 154 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 CD37P11049 281 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 PTHLHP12272 177 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 SRD5A2P31213 254 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 NTF4P34130 210 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 MMP16P51512 607 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 FOXO1Q12778 655 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 TOMM20Q15388 145 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 C6orf183Q5T699 404 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 FAM166AQ6J272 317 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 GGNQ86UU5 652 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 SYNPRQ8TBG9 265 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 OR2M2Q96R28 347 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 PIGQQ9BRB3 760 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 PNRC2Q9NPJ4 139 aaKnown RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 DDX28Q9NUL7 540 aaKnown RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 STMN3Q9NZ72 180 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 IL17BQ9UHF5 180 aa5.8□□□□□ -1.48
USP47-201ENST00000305481 GDF2Q9UK05 429 aaPredicted RBP5.8□□□□□ -1.48
USP47-201ENST00000305481 DHDHQ9UQ10 334 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms