RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 LOC102723996A0A087X1L8 192 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 TNFSF11O14788 317 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 DKK1O94907 266 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 QDPRP09417 244 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 SLC6A1P30531 599 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 POU3F4P49335 361 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 RGS19P49795 217 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 SLC7A5P1Q8MH63 180 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 LRRC18Q8N456 261 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ST7LQ8TDW4 575 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ASB5Q8WWX0 329 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 SLAMF6Q96DU3 332 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 ZNF486Q96H40 463 aaPredicted RBP12.98□□□□□ -0.33
SMG8-201ENST00000300917 FOXJ2Q9P0K8 574 aa12.98□□□□□ -0.33
SMG8-201ENST00000300917 TRAF3IP2O43734 574 aaPredicted RBP12.97□□□□□ -0.33
SMG8-201ENST00000300917 DCTDP32321 178 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 TRA2AQ13595 282 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMG8-201ENST00000300917 EXT1Q16394 746 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 DUSP18Q8NEJ0 188 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 ZNF385AQ96PM9 386 aaKnown RBP12.97□□□□□ -0.33
SMG8-201ENST00000300917 POTEKPQ9BYX7 375 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 ZCCHC4Q9H5U6 513 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 PROK2Q9HC23 129 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 EXPH5Q8NEV8 1989 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 IGHMP01871 453 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 PTBP1P26599 531 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMG8-201ENST00000300917 PITPNAQ00169 270 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 TAF13Q15543 124 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 GLYATL3Q5SZD4 288 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 PPP1R32Q7Z5V6 425 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 ZNF227Q86WZ6 799 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 OR6N1Q8NGY5 312 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 FOXJ3Q9UPW0 622 aa12.97□□□□□ -0.33
SMG8-201ENST00000300917 A0A0A6YYJ9 748 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 ONECUT2O95948 504 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 IGHG1P01857 330 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 CD1AP06126 327 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 RFPL3SP0C7P2 107 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 BPHLQ86WA6 291 aaPredicted RBP12.96□□□□□ -0.33
SMG8-201ENST00000300917 CATSPERDQ86XM0 798 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 FAM46BQ96A09 425 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 FGGYQ96C11 551 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 MNTQ99583 582 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 MARVELD1Q9BSK0 173 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 TRAV18A0A075B6X5 111 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 TCRBP04435 133 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 PTH2RP49190 550 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 MMP15P51511 669 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 SNRPD2P62316 118 aaKnown RBP12.96□□□□□ -0.33
SMG8-201ENST00000300917 ZP4Q12836 540 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 PLA1AQ53H76 456 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 C6orf15Q6UXA7 325 aaPredicted RBP12.96□□□□□ -0.33
SMG8-201ENST00000300917 MCHR2Q969V1 340 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 OR10A4Q9H209 315 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 DPAGT1Q9H3H5 408 aa12.96□□□□□ -0.33
SMG8-201ENST00000300917 TRBV5-7A0A0A0MS05 114 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 CD2P06729 351 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 BLVRAP53004 296 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 PRSS12P56730 875 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 TAS2R20P59543 309 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 C2orf76Q3KRA6 126 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 TMPPEQ6ZT21 453 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 BIVMQ86UB2 503 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 OR10S1Q8NGN2 331 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 OR8S1Q8NH09 359 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 OR14L1PQ8NHC6 308 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 HAVCR2Q8TDQ0 301 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 MS4A3Q96HJ5 214 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 ZNF222Q9UK12 451 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 ELF5Q9UKW6 265 aaPredicted RBP12.96□□□□□ -0.34
SMG8-201ENST00000300917 R4GMQ9 66 aa12.96□□□□□ -0.34
SMG8-201ENST00000300917 A0A1W2PNU3 283 aaPredicted RBP12.95□□□□□ -0.34
SMG8-201ENST00000300917 LAP3P28838 519 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 P2RY4P51582 365 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 ROM1Q03395 351 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 FCN2Q15485 313 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 TEX30Q5JUR7 227 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 FAM205BPQ63HN1 556 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 SPINK14Q6IE38 97 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 ZNF627Q7L945 461 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 SMIM4Q8WVI0 70 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 PHYHIPQ92561 330 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 ATG5Q9H1Y0 275 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 P4HTMQ9NXG6 502 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 STEAP1Q9UHE8 339 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 GDF2Q9UK05 429 aaPredicted RBP12.95□□□□□ -0.34
SMG8-201ENST00000300917 PCNX2A6NKB5 2137 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 A0A1W2PQ72 361 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 CENPBD1B2RD01 187 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 ZIC3O60481 467 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 PGA4P0DJD7 388 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 PGA3P0DJD8 388 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 LIFP15018 202 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 HSD11B1P28845 292 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 KLHL24Q6TFL4 600 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 RNF144BQ7Z419 303 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 FADS6Q8N9I5 356 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 NOXO1Q8NFA2 376 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 OR2AJ1Q8NGZ0 328 aa12.95□□□□□ -0.34
SMG8-201ENST00000300917 OR51E1Q8TCB6 317 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms