RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CSF2RAP15509 400 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 PSMB6P28072 239 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 TSFMP43897 325 aaKnown RBP13.23□□□□□ -0.29
COL6A2-201ENST00000300527 MFGE8Q08431 387 aaPredicted RBP13.23□□□□□ -0.29
COL6A2-201ENST00000300527 CST6Q15828 149 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 DHRS7BQ6IAN0 325 aaPredicted RBP13.23□□□□□ -0.29
COL6A2-201ENST00000300527 CBLN3Q6UW01 205 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 PRR22Q8IZ63 422 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 FAM3CQ92520 227 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 PIK3IP1Q96FE7 263 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 SPACA5Q96QH8 159 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 CENPMQ9NSP4 180 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 MRPS33Q9Y291 106 aaKnown RBP13.23□□□□□ -0.29
COL6A2-201ENST00000300527 NDUFS6O75380 124 aaKnown RBP13.23□□□□□ -0.29
COL6A2-201ENST00000300527 SFTA3P0C7M3 94 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 FABP9Q0Z7S8 132 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 EIF2S3LQ2VIR3 472 aaKnown RBP13.23□□□□□ -0.29
COL6A2-201ENST00000300527 ZNF684Q5T5D7 378 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 CNKSR3Q6P9H4 555 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 OR13C3Q8NGS6 347 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 AKR1E2Q96JD6 320 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 ZNF285Q96NJ3 590 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 LPAR4Q99677 370 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 TEX101Q9BY14 249 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 NMNAT2Q9BZQ4 307 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 METTL8Q9H825 291 aaKnown RBP13.23□□□□□ -0.29
COL6A2-201ENST00000300527 NOTCH4Q99466 2003 aa13.23□□□□□ -0.29
COL6A2-201ENST00000300527 ARPC3O15145 178 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 SLC16A7O60669 478 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 ABHD16AO95870 558 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 CD8AP01732 235 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 ALOX5APP20292 161 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 F2RL1P55085 397 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 KDM8Q8N371 416 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 TMEM229BQ8NBD8 167 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 KTI12Q96EK9 354 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-201ENST00000300527 RRNAD1Q96FB5 475 aaKnown RBP13.22□□□□□ -0.29
COL6A2-201ENST00000300527 KLHDC3Q9BQ90 382 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 ZNF426Q9BUY5 554 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 CHRDQ9H2X0 955 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 Q9N2J8 555 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 EPHA6Q9UF33 1036 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 AK1P00568 194 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 SFTPBP07988 381 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 NQO2P16083 231 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 NPY4RP50391 375 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 RASGEF1BQ0VAM2 473 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 MESTQ5EB52 335 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 AGBL4Q5VU57 503 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 C1QL3Q5VWW1 255 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 TMEM225Q6GV28 225 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 GHRLQ9UBU3 117 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 TRBV5-7A0A0A0MS05 114 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 A0A1W2PPE3 182 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 MED19A0JLT2 244 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-201ENST00000300527 LRP3O75074 770 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 ZNF432O94892 652 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 CD1AP06126 327 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 GNB3P16520 340 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 RCC1P18754 421 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-201ENST00000300527 S100A12P80511 92 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 VWA2Q5GFL6 755 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 TMEM31Q5JXX7 168 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 CDC20BQ86Y33 519 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 TSPAN32Q96QS1 320 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 LAT2Q9GZY6 243 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 EMC9Q9Y3B6 208 aa13.22□□□□□ -0.29
COL6A2-201ENST00000300527 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 COL4A6Q14031 1691 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 A0A1B0GTI1 187 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 POM121BA6NF01 834 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 SERINC4A6NH21 518 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 METTL12A8MUP2 240 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 HTR3BO95264 441 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 MPZL1O95297 269 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 ABOP16442 354 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 ADH6P28332 368 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 ZNF345Q14585 488 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 ADAM5Q6NVV9 412 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 ZNF595Q8IYB9 648 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 PHYHIPLQ96FC7 376 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 SULT4A1Q9BR01 284 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 BCL2L14Q9BZR8 327 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 RTTNQ86VV8 2226 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 PQLC2LA1A4F0 135 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 CXCL10P02778 98 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 IFNA4P05014 189 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 HOXB5P09067 269 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 CD1CP29017 333 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 PPP1CAP62136 330 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 PJVKQ0ZLH3 352 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 HABP2Q14520 560 aaPredicted RBP13.21□□□□□ -0.29
COL6A2-201ENST00000300527 METTL21AQ8WXB1 218 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 CYYR1Q96J86 154 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 GAS2L1Q99501 681 aaPredicted RBP13.21□□□□□ -0.29
COL6A2-201ENST00000300527 ZFYVE21Q9BQ24 234 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 NRIP2Q9BQI9 281 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 TIMM29Q9BSF4 260 aa13.21□□□□□ -0.29
COL6A2-201ENST00000300527 NAA11Q9BSU3 229 aaPredicted RBP13.21□□□□□ -0.29
COL6A2-201ENST00000300527 ALX4Q9H161 411 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms