RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 FOSL1P15407 271 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 PRPS1P60891 318 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 ALG11Q2TAA5 492 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 ADAM5Q6NVV9 412 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 ZNF550Q7Z398 422 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 TRAPPC6BQ86SZ2 158 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 FOXRED2Q8IWF2 684 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 ZNF561Q8N587 486 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 C15orf54Q8N8G6 183 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 MRGPRFQ96AM1 343 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 INTS12Q96CB8 462 aaKnown RBP11.74□□□□□ -0.53
TVP23A-201ENST00000299866 RNF122Q9H9V4 155 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 SEBOXQ9HB31 216 aaPredicted RBP11.74□□□□□ -0.53
TVP23A-201ENST00000299866 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.74□□□□□ -0.53
TVP23A-201ENST00000299866 GRHPRQ9UBQ7 328 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 EIF1AYO14602 144 aaKnown RBP11.74□□□□□ -0.53
TVP23A-201ENST00000299866 GMFGO60234 142 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 FBXO24O75426 580 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 FOLR2P14207 255 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 MAOAP21397 527 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 EIF1AXP47813 144 aaKnown RBP11.74□□□□□ -0.53
TVP23A-201ENST00000299866 EXOSC6Q5RKV6 272 aaKnown RBP11.74□□□□□ -0.53
TVP23A-201ENST00000299866 TMEM225Q6GV28 225 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 DHRS11Q6UWP2 260 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 LRRC3BQ96PB8 259 aa11.74□□□□□ -0.53
TVP23A-201ENST00000299866 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 PMS2P1A4D2B8 440 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 OR10H2O60403 315 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 CTSVO60911 334 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 ADAP1O75689 374 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 LY86O95711 162 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 PNPP00491 289 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 PLGP00747 810 aaPredicted RBP11.73□□□□□ -0.53
TVP23A-201ENST00000299866 WASP42768 502 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 RPS15AP62244 130 aaKnown RBP11.73□□□□□ -0.53
TVP23A-201ENST00000299866 GPR18Q14330 331 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 SLC9A3R2Q15599 337 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 SGCAQ16586 387 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 NCMAPQ5T1S8 102 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 SECTM1Q8WVN6 248 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 FAM46BQ96A09 425 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 INTS14Q96SY0 518 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 PFDN5Q99471 154 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 SLC17A5Q9NRA2 495 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 OR5AC2Q9NZP5 309 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 LRIT1Q9P2V4 623 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 M0R036 132 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 EFSO43281 561 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 GPR75O95800 540 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 IFNA6P05013 189 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 RHOP08100 348 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 HLA-GP17693 338 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 TACR3P29371 465 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 HRH1P35367 487 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 RNF212Q495C1 297 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 FCRL6Q6DN72 434 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 WDSUB1Q8N9V3 476 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 MARCH1Q8TCQ1 289 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 TCTEX1D2Q8WW35 142 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 SUSD6Q92537 303 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 TCEAL7Q9BRU2 100 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.73□□□□□ -0.53
TVP23A-201ENST00000299866 CKLFQ9UBR5 152 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 MPDZO75970 2070 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 HEATR5AQ86XA9 2040 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 A0A087WV62 115 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 TBC1D3DA0A087WVF3 549 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 TBC1D3IA0A087WXS9 549 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 TBC1D3LB9A6J9 549 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 MBTPS2O43462 519 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 PMP2P02689 132 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 TBC1D3HP0C7X1 549 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 RCC1P18754 421 aaPredicted RBP11.73□□□□□ -0.53
TVP23A-201ENST00000299866 PSG6Q00889 435 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 NAAAQ02083 359 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 ENPP2Q13822 863 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 MEF2DQ14814 521 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 EBPQ15125 230 aaKnown RBP11.73□□□□□ -0.53
TVP23A-201ENST00000299866 TBC1D3CQ6IPX1 549 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 TBC1D3Q8IZP1 549 aaPredicted RBP11.73□□□□□ -0.53
TVP23A-201ENST00000299866 CSNK1A1LQ8N752 337 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 EXD3Q8N9H8 876 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 SLC25A44Q96H78 314 aaPredicted RBP11.73□□□□□ -0.53
TVP23A-201ENST00000299866 SLCO5A1Q9H2Y9 848 aa11.73□□□□□ -0.53
TVP23A-201ENST00000299866 GATCO43716 136 aaKnown RBP11.72□□□□□ -0.53
TVP23A-201ENST00000299866 NKX2-2O95096 273 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 IL2RAP01589 272 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 SLC25A1P53007 311 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 HTRA3P83110 453 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 MGAT2Q10469 447 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 OR2B11Q5JQS5 317 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 MDGA2Q7Z553 956 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 ZNF563Q8TA94 476 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 KIRREL1Q96J84 757 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 IP6K3Q96PC2 410 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 OR8U8P0C7N1 319 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 PI3P19957 117 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 MESTQ5EB52 335 aa11.72□□□□□ -0.53
TVP23A-201ENST00000299866 FAM166AQ6J272 317 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms