RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 OR4K5Q8NGD3 323 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 OR13C2Q8NGS9 318 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 ASB10Q8WXI3 467 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 HTRA1Q92743 480 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 NEUROG1Q92886 237 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 PIGTQ969N2 578 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 RADILQ96JH8 1075 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 ARPC5LQ9BPX5 153 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 TXNIPQ9H3M7 391 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 ZNF346Q9UL40 294 aaKnown RBP10.55□□□□□ -0.72
HMGB2-201ENST00000296503 TMCC3Q9ULS5 477 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 MYO9AB2RTY4 2548 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 HMX3A6NHT5 357 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 TBX1O43435 398 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 PGA4P0DJD7 388 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 PGA3P0DJD8 388 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 RRM2P31350 389 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 IL5RAQ01344 420 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 MAD2L1BPQ15013 274 aaPredicted RBP10.55□□□□□ -0.72
HMGB2-201ENST00000296503 SEC23BQ15437 767 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 DEFB113Q30KQ7 82 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 YIF1BQ5BJH7 314 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 LRFN4Q6PJG9 635 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 SPERTQ8NA61 448 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 LILRB1Q8NHL6 650 aaPredicted RBP10.55□□□□□ -0.72
HMGB2-201ENST00000296503 FBXW5Q969U6 566 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 CCL19Q99731 98 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 NELFAQ9H3P2 528 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 CISD1Q9NZ45 108 aaKnown RBP10.55□□□□□ -0.72
HMGB2-201ENST00000296503 CSMD2Q7Z408 3487 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 DSCAMO60469 2012 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 ARPC4-TTLL3A0A0A6YYG9 625 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 CDC42EP2O14613 210 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 DHHO43323 396 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 OR10H3O60404 316 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 MT-ND2P03891 347 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 IGFBP5P24593 272 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 PSMB9P28065 219 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 ACVR1BP36896 505 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 ARHGDIAP52565 204 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 P2RX3P56373 397 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 RPL27P61353 136 aaKnown RBP10.54□□□□□ -0.72
HMGB2-201ENST00000296503 RUNX1T1Q06455 604 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 PIGFQ07326 219 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 GPR50Q13585 617 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 ZNF672Q499Z4 452 aaPredicted RBP10.54□□□□□ -0.72
HMGB2-201ENST00000296503 ZFP69Q49AA0 526 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 ATAD3CQ5T2N8 411 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 CCDC190Q86UF4 302 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 CCDC36Q8IYA8 594 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 ZNF611Q8N823 705 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 MBD6Q96DN6 1003 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 ST6GAL2Q96JF0 529 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 FOXB1Q99853 325 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 KCNS3Q9BQ31 491 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 CDADC1Q9BWV3 514 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 POLE4Q9NR33 117 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 LYVE1Q9Y5Y7 322 aa10.54□□□□□ -0.72
HMGB2-201ENST00000296503 XPNPEP2O43895 674 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 AIREO43918 545 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 CD79AP11912 226 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 B4GALT1P15291 398 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 OMPP47874 163 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 ZNF84P51523 738 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 CDH11P55287 796 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 RPS4XP62701 263 aaKnown RBP10.53□□□□□ -0.72
HMGB2-201ENST00000296503 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.53□□□□□ -0.72
HMGB2-201ENST00000296503 ARMC4Q5T2S8 1044 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 SMAP2Q8WU79 429 aaPredicted RBP10.53□□□□□ -0.72
HMGB2-201ENST00000296503 MCHR2Q969V1 340 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 SLC38A2Q96QD8 506 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 RBP7Q96R05 134 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 FOXC2Q99958 501 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 MRPL13Q9BYD1 178 aaKnown RBP10.53□□□□□ -0.72
HMGB2-201ENST00000296503 FKBP14Q9NWM8 211 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 LAMP3Q9UQV4 416 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 ATP23Q9Y6H3 246 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 UNC119BA6NIH7 251 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 NPIPB13A6NJU9 1138 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 SHISA9B4DS77 424 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 NPIPB4C9JG80 1138 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 TNFRSF11BO00300 401 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 SMPD2O60906 423 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 PTP4A3O75365 173 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 CRYZL1O95825 349 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 SPNP16150 400 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 CBR1P16152 277 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 IFNGR2P38484 337 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 MAP2K4P45985 399 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 ERVK-25P63136 954 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 SPOCK1Q08629 439 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 FHL1Q13642 323 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 LRRC75AQ8NAA5 344 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 ZNF540Q8NDQ6 660 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 NOXO1Q8NFA2 376 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 CNIH3Q8TBE1 160 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 SUN5Q8TC36 379 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 TMEM171Q8WVE6 324 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 DHRS9Q9BPW9 319 aa10.53□□□□□ -0.72
HMGB2-201ENST00000296503 FUZQ9BT04 418 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms