RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 FOXH1O75593 365 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 ZNF205O95201 554 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 MT-ND5P03915 603 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 ADH4P08319 380 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 TSPAN19P0C672 248 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 GATA3P23771 443 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 LAP3P28838 519 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 ATP4BP51164 291 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 TNFAIP6P98066 277 aaPredicted RBP7.81□□□□□ -1.16
CNOT9-202ENST00000295701 SRSF4Q08170 494 aaKnown RBP7.81□□□□□ -1.16
CNOT9-202ENST00000295701 CD47Q08722 323 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 PSG7Q13046 419 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 ZNF154Q13106 437 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 BAMBIQ13145 260 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 TOP3AQ13472 1001 aaPredicted RBP7.81□□□□□ -1.16
CNOT9-202ENST00000295701 PIN1Q13526 163 aaPredicted RBP7.81□□□□□ -1.16
CNOT9-202ENST00000295701 NRN1LQ496H8 165 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 ARMCX4Q5H9R4 360 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 OTPQ5XKR4 325 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 IGFN1Q86VF2 1251 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 SLC26A7Q8TE54 656 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 SGTBQ96EQ0 304 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 MPP4Q96JB8 637 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 C4orf45Q96LM5 186 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 SLC19A3Q9BZV2 496 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 OR2H1Q9GZK4 316 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 EGLN1Q9GZT9 426 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 PCDHAC1Q9H158 963 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 KCNN2Q9H2S1 579 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 KAT8Q9H7Z6 458 aaKnown RBP7.81□□□□□ -1.16
CNOT9-202ENST00000295701 PATZ1Q9HBE1 687 aaKnown RBP7.81□□□□□ -1.16
CNOT9-202ENST00000295701 TMEM106BQ9NUM4 274 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 RIMS3Q9UJD0 308 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 NUP50Q9UKX7 468 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 SH3GLB1Q9Y371 365 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 AUP1Q9Y679 476 aa7.81□□□□□ -1.16
CNOT9-202ENST00000295701 MDFIC2A0A1B0GVS7 189 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 TIMM8AO60220 97 aaPredicted RBP7.8□□□□□ -1.16
CNOT9-202ENST00000295701 GPANK1O95872 356 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 IGHMP01871 453 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 CD55P08174 381 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 IGHV4-38-2P0DP08 117 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 ZNF12P17014 697 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 OMGP23515 440 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 CD80P33681 288 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 PCGF2P35227 344 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 OR1E2P47887 323 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 SLC6A9P48067 706 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 ERFP50548 548 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 DAP3P51398 398 aaKnown RBP7.8□□□□□ -1.16
CNOT9-202ENST00000295701 TAS2R41P59536 307 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 SLC3A1Q07837 685 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 CDK5R2Q13319 367 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 NFYCQ13952 458 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 ENDOGQ14249 297 aaKnown RBP7.8□□□□□ -1.16
CNOT9-202ENST00000295701 ZMYND11Q15326 602 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 TAF11Q15544 211 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 PDLIM3Q53GG5 364 aaPredicted RBP7.8□□□□□ -1.16
CNOT9-202ENST00000295701 MTX3Q5HYI7 312 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 FAM27BQ5VT28 67 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 RBMS3Q6XE24 437 aaKnown RBP7.8□□□□□ -1.16
CNOT9-202ENST00000295701 PATL1Q86TB9 770 aaKnown RBP7.8□□□□□ -1.16
CNOT9-202ENST00000295701 LRRC28Q86X40 367 aaPredicted RBP7.8□□□□□ -1.16
CNOT9-202ENST00000295701 MICU2Q8IYU8 434 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 DPP10Q8N608 796 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 LRRC8CQ8TDW0 803 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 TMEM239Q8WW34 195 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 ITLN1Q8WWA0 313 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 POP5Q969H6 163 aaKnown RBP7.8□□□□□ -1.16
CNOT9-202ENST00000295701 SIGLEC11Q96RL6 698 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 TXNIPQ9H3M7 391 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 PLEK2Q9NYT0 353 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 STARD10Q9Y365 291 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 NDUFAF1Q9Y375 327 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 INSIG2Q9Y5U4 225 aa7.8□□□□□ -1.16
CNOT9-202ENST00000295701 PPIAL4EA0A075B759 164 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 PPIAL4CA0A0B4J2A2 164 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 KRTAP4-8A0A0G2JLE6 195 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 IGHV3-64DA0A0J9YX35 117 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 A0A1W2PPL8 197 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 CENPBD1B2RD01 187 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 F5H0A9 414 aaPredicted RBP7.79□□□□□ -1.16
CNOT9-202ENST00000295701 PPIAL4DF5H284 164 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 H7C1C5 153 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 FBP2O00757 339 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 CST2P09228 141 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 PPIAL4FP0DN26 164 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 MDKP21741 143 aaPredicted RBP7.79□□□□□ -1.16
CNOT9-202ENST00000295701 CTXN1P60606 82 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 RPL27P61353 136 aaKnown RBP7.79□□□□□ -1.16
CNOT9-202ENST00000295701 LCN6P62502 163 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 PAX8Q06710 450 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 SLC9A3R2Q15599 337 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 VMACQ2NL98 169 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 RABL3Q5HYI8 236 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 LEG1Q6P5S2 330 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 CCDC80Q76M96 950 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 ZNF283Q8N7M2 679 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 LRRC75AQ8NAA5 344 aa7.79□□□□□ -1.16
CNOT9-202ENST00000295701 OR2Z1Q8NG97 314 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms