RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RGS11O94810 467 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 LGI1O95970 557 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 CSF3P09919 207 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ARNTP27540 789 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 IL2RGP31785 369 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 MTCP1P56278 107 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 RAB38P57729 211 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 AQP6Q13520 282 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 RNF212Q495C1 297 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 SFRP5Q5T4F7 317 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ATPAF1Q5TC12 328 aaPredicted RBP10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF705AQ6ZN79 300 aaPredicted RBP10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 FAM57BQ71RH2 274 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 C1orf87Q8N0U7 546 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR52I2Q8NH67 350 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZFPM2Q8WW38 1151 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 DVL3Q92997 716 aaPredicted RBP10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ANKRD9Q96BM1 317 aaPredicted RBP10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 TEAD3Q99594 435 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 CHST8Q9H2A9 424 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 ARID1BQ8NFD5 2236 aaPredicted RBP10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 GPR3P46089 330 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 CAMK2BQ13554 666 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 NLRC3Q7RTR2 1065 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 PRSS45Q7RTY3 260 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 PRICKLE2Q7Z3G6 844 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 NANPQ8TBE9 248 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 MITD1Q8WV92 249 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 TAF9BQ9HBM6 251 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 CHD9Q3L8U1 2897 aa10.81□□□□□ -0.68
SYNGAP1-201ENST00000293748 JTBO76095 146 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF93P35789 620 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 RPS15P62841 145 aaKnown RBP10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 ACVR1Q04771 509 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 TPBGQ13641 420 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 MEP1BQ16820 701 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF761Q86XN6 746 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 SKA3Q8IX90 412 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 FOXN4Q96NZ1 517 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 MED18Q9BUE0 208 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 SEMA4CQ9C0C4 833 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 ADAM19Q9H013 955 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 TRAV36DV7A0A075B6V5 113 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 A0A1B0GUH1 482 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 TO15178 435 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLCO2B1O94956 709 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 GP1BAP07359 652 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 MZT1Q08AG7 82 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 C17orf107Q6ZR85 190 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 SH2D5Q6ZV89 423 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 ESPNLQ6ZVH7 1005 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 MMP21Q8N119 569 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC22A18ASQ8N1D0 253 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 FAM181AQ8N9Y4 354 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF740Q8NDX6 193 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR5L1Q8NGL2 311 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 OR1J2Q8NGS2 313 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 CCDC74AQ96AQ1 378 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 SRRQ9GZT4 340 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 PCOLCE2Q9UKZ9 415 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 PPT2Q9UMR5 302 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 SPAARA0A1B0GVQ0 90 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 ARRDC5A6NEK1 342 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 MCRIP1C9JLW8 97 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 FTH1P19P0C7X4 201 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 FCGR2AP12318 317 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 FOLR1P15328 257 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 TRHRP34981 398 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 P2RX3P56373 397 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 DGCR2P98153 550 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 HNF4GQ14541 408 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 CLINT1Q14677 625 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 GLYR1Q49A26 553 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 MFSD12Q6NUT3 480 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 MOB3CQ70IA8 216 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 APH1BQ8WW43 257 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 LRFN5Q96NI6 719 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 HAO2Q9NYQ3 351 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 A0A0A6YYJ9 748 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 AADACL3Q5VUY0 350 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC48A1Q6P1K1 146 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 FAHD1Q6P587 224 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 BAGE3Q86Y29 109 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 BAGE2Q86Y30 109 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 CDH26Q8IXH8 852 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC46A1Q96NT5 459 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 POFUT1Q9H488 388 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 KCNIP2Q9NS61 270 aa10.8□□□□□ -0.68
SYNGAP1-201ENST00000293748 TMEM127O75204 238 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 CD79AP11912 226 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC19A1P41440 591 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 EIF3IQ13347 325 aaKnown RBP10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 SLC36A2Q495M3 483 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 TOR2AQ5JU69 321 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 FAM199XQ6PEV8 388 aaPredicted RBP10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 FAM111BQ6SJ93 734 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 S100A7AQ86SG5 101 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 MISPQ8IVT2 679 aa10.79□□□□□ -0.68
SYNGAP1-201ENST00000293748 PIGCQ92535 297 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms