RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 EBPQ15125 230 aaKnown RBP11.65□□□□□ -0.55
PTCD1-201ENST00000292478 VWA2Q5GFL6 755 aa11.65□□□□□ -0.55
PTCD1-201ENST00000292478 TMUB2Q71RG4 321 aa11.65□□□□□ -0.55
PTCD1-201ENST00000292478 SYT13Q7L8C5 426 aa11.65□□□□□ -0.55
PTCD1-201ENST00000292478 FJX1Q86VR8 437 aa11.65□□□□□ -0.55
PTCD1-201ENST00000292478 CADM3Q8N126 398 aa11.65□□□□□ -0.55
PTCD1-201ENST00000292478 OR1S2Q8NGQ3 325 aa11.65□□□□□ -0.55
PTCD1-201ENST00000292478 ATOH1Q92858 354 aaPredicted RBP11.65□□□□□ -0.55
PTCD1-201ENST00000292478 PCDHGA5Q9Y5G8 931 aa11.65□□□□□ -0.55
PTCD1-201ENST00000292478 STRCP1A6NGW2 1772 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 KCNE1BA0A087WTH5 132 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 A0A1W2PPH5 198 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 ZC3H12DA2A288 527 aaKnown RBP11.64□□□□□ -0.55
PTCD1-201ENST00000292478 IFITM5A6NNB3 132 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 XRCC2O43543 280 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 GLAP06280 429 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 HOXA1P49639 335 aaPredicted RBP11.64□□□□□ -0.55
PTCD1-201ENST00000292478 RAB5CP51148 216 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 FZD2Q14332 565 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 PAQR6Q6TCH4 344 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 PRSS45Q7RTY3 260 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 TP53I13Q8NBR0 393 aaPredicted RBP11.64□□□□□ -0.55
PTCD1-201ENST00000292478 PMS2P1A4D2B8 440 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 LRRC30A6NM36 301 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 LMO7DNF2Z398 122 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 DEGS1O15121 323 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 TUSC2O75896 110 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 UBE2KP61086 200 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 FABP5Q01469 135 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 LFNGQ8NES3 379 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 EMG1Q92979 244 aaKnown RBP11.64□□□□□ -0.55
PTCD1-201ENST00000292478 TSLPQ969D9 159 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 OR2A14Q96R47 310 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 PRDM7Q9NQW5 492 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 PDE4DIPQ5VU43 2346 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 OR2F2O95006 317 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 OR2F1Q13607 317 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 TFAP2EQ6VUC0 442 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 POLDIP2Q9Y2S7 368 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 HRH3Q9Y5N1 445 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 BTBD17A6NE02 478 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 ANKUB1A6NFN9 424 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 STMND1H3BQB6 276 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 SRP9P49458 86 aaKnown RBP11.64□□□□□ -0.55
PTCD1-201ENST00000292478 EMDP50402 254 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 KANSL1Q7Z3B3 1105 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 GABRG1Q8N1C3 465 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 OR52N5Q8NH56 324 aa11.64□□□□□ -0.55
PTCD1-201ENST00000292478 GALP22466 123 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 RPL35P42766 123 aaKnown RBP11.63□□□□□ -0.55
PTCD1-201ENST00000292478 NPY4RP50391 375 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 GDPD3Q7L5L3 318 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 OR51E1Q8TCB6 317 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 RNF167Q9H6Y7 350 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 AKIP1Q9NQ31 210 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 SERTAD4Q9NUC0 356 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 AGAP14A8MT82 685 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 HSBP1L1C9JCN9 74 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 ZGLP1P0C6A0 271 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 CISD3P0C7P0 127 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 HOXC8P31273 242 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 ALG14Q96F25 216 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 SPNS1Q9H2V7 528 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 SLC39A9Q9NUM3 307 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 SNRPGP15A8MWD9 76 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 CSF3P09919 207 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 RAE1P78406 368 aaKnown RBP11.63□□□□□ -0.55
PTCD1-201ENST00000292478 KIAA0040Q15053 153 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 TOMM34Q15785 309 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-201ENST00000292478 C1orf53Q5VUE5 145 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 FAM213BQ8TBF2 198 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
PTCD1-201ENST00000292478 BOD1Q96IK1 185 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 USB1Q9BQ65 265 aaKnown RBP11.63□□□□□ -0.55
PTCD1-201ENST00000292478 EMC6Q9BV81 110 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 WWTR1Q9GZV5 400 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 A4GNTQ9UNA3 340 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 ASPDHA6ND91 283 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 CLDN1O95832 211 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 TBXA2RP21731 343 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 CLDN20P56880 219 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 C21orf58P58505 322 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 HTRA4P83105 476 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-201ENST00000292478 FGF14Q92915 247 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 RNF170Q96K19 258 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 ASH2LQ9UBL3 628 aa11.63□□□□□ -0.55
PTCD1-201ENST00000292478 M0R135 149 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 ANKRD34AQ69YU3 496 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 CADM4Q8NFZ8 388 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 OIT3Q8WWZ8 545 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 RBPMSQ93062 196 aaKnown RBP11.62□□□□□ -0.55
PTCD1-201ENST00000292478 MARC2Q969Z3 335 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 ZNF799Q96GE5 643 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 MRGPRX3Q96LB0 322 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 HRASLSQ9HDD0 168 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 SLC5A6Q9Y289 635 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 POM121CA8CG34 1229 aa11.62□□□□□ -0.55
PTCD1-201ENST00000292478 SCAF4O95104 1147 aaKnown RBP11.62□□□□□ -0.55
PTCD1-201ENST00000292478 DUSP1P28562 367 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms