RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 OR51J1Q9H342 316 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 TAS2R5Q9NYW4 299 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 PTPRQQ9UMZ3 2332 aa15.01□□□□□ -0.01
CPSF4-201ENST00000292476 A0A1B0GVC2 190 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 A0A1B0GVI7 797 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 A6NIN4 97 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 NPIPB13A6NJU9 1138 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 NPIPB4C9JG80 1138 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 PLPP3O14495 311 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 XKRYO14609 159 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 PRAF2O60831 178 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 ANXA3P12429 323 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 CD96P40200 585 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 SRP9P49458 86 aaKnown RBP15□□□□□ -0.01
CPSF4-201ENST00000292476 NANOS3P60323 173 aaKnown RBP15□□□□□ -0.01
CPSF4-201ENST00000292476 CXADRP78310 365 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 PUDPQ08623 228 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 INPP5JQ15735 1006 aaPredicted RBP15□□□□□ -0.01
CPSF4-201ENST00000292476 EEF1A1P5Q5VTE0 462 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 C1QL3Q5VWW1 255 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 ADPRHL1Q8NDY3 354 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 OR5AK2Q8NH90 309 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 ZFP3Q96NJ6 502 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 GNRHR2Q96P88 292 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 GFI1Q99684 422 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 FAM173AQ9BQD7 235 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 WDR76Q9H967 626 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 ANKRD10Q9NXR5 420 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 MRM2Q9UI43 246 aaKnown RBP15□□□□□ -0.01
CPSF4-201ENST00000292476 A0A0B4J203 849 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 A0A1W2PPK0 400 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 LIPT2A6NK58 231 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 TMEM212A6NML5 194 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 IGHMP01871 453 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 F13BP05160 661 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 H2AFB2P0C5Z0 115 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 GIFP27352 417 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 GDNFP39905 211 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 BLVRAP53004 296 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 SNTB2Q13425 540 aaKnown RBP15□□□□□ -0.01
CPSF4-201ENST00000292476 FCN2Q15485 313 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 OR7A5Q15622 319 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 FAM205BPQ63HN1 556 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 FDX2Q6P4F2 183 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 UTS2BQ765I0 119 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF417Q8TAU3 575 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 SLC25A38Q96DW6 304 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 ADAD1Q96M93 576 aaKnown RBP15□□□□□ -0.01
CPSF4-201ENST00000292476 TSPAN32Q96QS1 320 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF587Q96SQ5 575 aaPredicted RBP15□□□□□ -0.01
CPSF4-201ENST00000292476 TXNIPQ9H3M7 391 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 ZFP64Q9NPA5 681 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 CHST11Q9NPF2 352 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 FANCFQ9NPI8 374 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 KLHL9Q9P2J3 617 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 B4GALT7Q9UBV7 327 aa15□□□□□ -0.01
CPSF4-201ENST00000292476 TRBV5-7A0A0A0MS05 114 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 A6NIZ1 184 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF891A8MT65 544 aaPredicted RBP14.99□□□□□ -0.01
CPSF4-201ENST00000292476 PRR32B1ATL7 298 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 H3BML4 177 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 LINC01387J3KSC0 135 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF254O75437 659 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 DAP3P51398 398 aaKnown RBP14.99□□□□□ -0.01
CPSF4-201ENST00000292476 CCR9P51686 369 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 TMPRSS3P57727 454 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 RAP1BP61224 184 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 RPL27P61353 136 aaKnown RBP14.99□□□□□ -0.01
CPSF4-201ENST00000292476 RAP1AP62834 184 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 RASGEF1BQ0VAM2 473 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 GSG1Q2KHT4 349 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 MESTQ5EB52 335 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 LIPNQ5VXI9 398 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 RAET1LQ5VY80 246 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 LAMTOR1Q6IAA8 161 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 SYT9Q86SS6 491 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 LUZP2Q86TE4 346 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 DTX3Q8N9I9 347 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF511Q8NB15 262 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 ARL5BQ96KC2 179 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 TCF7L1Q9HCS4 588 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 DIABLOQ9NR28 239 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 LAMP5Q9UJQ1 280 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 LHX6Q9UPM6 363 aa14.99□□□□□ -0.01
CPSF4-201ENST00000292476 TRAV6A0A075B6T7 132 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 ARGFXA6NJG6 315 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 ACOD1A6NK06 481 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 EFSO43281 561 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 KRT33AO76009 404 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 DNASE1L1P49184 302 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 GNG2P59768 71 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 RAC1P63000 192 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 SLC35A1P78382 337 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 MYBPHQ13203 477 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 OR1C1Q15619 314 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 OLFML2AQ68BL7 652 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 STAC2Q6ZMT1 411 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 HDDC2Q7Z4H3 204 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 C9orf62Q8N4C0 152 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 ASB17Q8WXJ9 295 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms