RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZNF239Q16600 458 aaKnown RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 IAH1Q2TAA2 248 aaPredicted RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 OR7E24Q6IFN5 339 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 OR52B4Q8NGK2 314 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 OR5M8Q8NGP6 311 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 USB1Q9BQ65 265 aaKnown RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 ELOVL3Q9HB03 270 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 TCRBV16S1A1N1A0A5B0 115 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 PPM1DO15297 605 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 SCAF4O95104 1147 aaKnown RBP10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 CNOT4O95628 575 aaKnown RBP10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 SNU13P55769 128 aaKnown RBP10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 OR7A5Q15622 319 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 WDR74Q6RFH5 385 aaPredicted RBP10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 GIMAP5Q96F15 307 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 PTDSS2Q9BVG9 487 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 UCK1Q9HA47 277 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 DLL4Q9NR61 685 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 UBQLN4Q9NRR5 601 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 CSAG2Q9Y5P2 127 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 MEIKINA0A087WXM9 373 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM200CA6NKL6 621 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 ERVH48-1M5A8F1 160 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 SFTPCP11686 197 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 FOXK2Q01167 660 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 MAMDC2Q7Z304 686 aaPredicted RBP10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 OR6S1Q8NH40 331 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 DNASE2BQ8WZ79 361 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 GCDHQ92947 438 aaPredicted RBP10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 RNF170Q96K19 258 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 FOXN4Q96NZ1 517 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 TNFRSF13CQ96RJ3 184 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 TXN2Q99757 166 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 SGPP1Q9BX95 441 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 PLEKHJ1Q9NW61 149 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 SIRT5Q9NXA8 310 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 KCMF1Q9P0J7 381 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 KLF13Q9Y2Y9 288 aaPredicted RBP10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 LINC00862A6NCI5 91 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 DFFBO76075 338 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 CD160O95971 181 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 SERPINA2P20848 420 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 HTD2P86397 168 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 ST3GAL2Q16842 350 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 KCNIP4Q6PIL6 250 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 MBOAT2Q6ZWT7 520 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 MDGA2Q7Z553 956 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 GPR137CQ8N3F9 429 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM99Q8N816 258 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 OR1S1Q8NH92 325 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 BORCS8Q96FH0 119 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 SUCNR1Q9BXA5 334 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 OR10A5Q9H207 317 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 TAS2R5Q9NYW4 299 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 KNL1Q8NG31 2342 aa10.37□□□□□ -0.75
NPC1L1-201ENST00000289547 GP1BAP07359 652 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 TACR3P29371 465 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 SDHAP31040 664 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 UBE2NP61088 152 aaKnown RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 HLXQ14774 488 aaPredicted RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 AGERQ15109 404 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 C4orf17Q53FE4 359 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 C9orf152Q5JTZ5 239 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM244Q5VVB8 128 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 FBXW12Q6X9E4 464 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 Q6ZTK2 550 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 CPEB2Q7Z5Q1 589 aaKnown RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 CMTM4Q8IZR5 234 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 PHYHIPQ92561 330 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 LCORQ96JN0 433 aaPredicted RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 CMSS1Q9BQ75 279 aaKnown RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 C1QTNF3Q9BXJ4 246 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF443Q9Y2A4 671 aaPredicted RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 NUP214P35658 2090 aaPredicted RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 ARID2Q68CP9 1835 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 IGLV3-16A0A075B6K0 115 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 OR6C76A6NM76 312 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 NME2P1O60361 137 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 GREM1O60565 184 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 HTR2CP28335 458 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 MRPL19P49406 292 aaKnown RBP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 CARD17Q5XLA6 110 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 FAM111BQ6SJ93 734 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 OR5M1Q8NGP8 315 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 ADOQ96SZ5 270 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 SELENOIQ9C0D9 397 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC25A31Q9H0C2 315 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 CHST8Q9H2A9 424 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF160Q9HCG1 818 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 RLFQ13129 1914 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 DDAH2O95865 285 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 PNMTP11086 282 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 FPR3P25089 353 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 DCTDP32321 178 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 LIM2P55344 173 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 PDE7AQ13946 482 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 FAM27D1Q5T7N8 215 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 Q6ZRG5 221 aa10.36□□□□□ -0.75
NPC1L1-201ENST00000289547 APH1BQ8WW43 257 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms