RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 K7EQS6 105 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 MFGE8Q08431 387 aaPredicted RBP16.84■□□□□ 0.29
PCDH1-201ENST00000287008 ROBO4Q8WZ75 1007 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 C1orf123Q9NWV4 160 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 FABP6P51161 128 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 LUMP51884 338 aaPredicted RBP16.84■□□□□ 0.29
PCDH1-201ENST00000287008 BLOC1S1P78537 153 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 ZNF766Q5HY98 468 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 ACER2Q5QJU3 275 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 LAX1Q8IWV1 398 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 RDH10Q8IZV5 341 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 OR13F1Q8NGS4 319 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 DEDD2Q8WXF8 326 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 OR2A5Q96R48 311 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 KCNJ15Q99712 375 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 SCN1AP35498 2009 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 RIF1Q5UIP0 2472 aaKnown RBP16.83■□□□□ 0.29
PCDH1-201ENST00000287008 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.29
PCDH1-201ENST00000287008 XRCC2O43543 280 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 TPPPO94811 219 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 RAP2BP61225 183 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 PMPCAQ10713 525 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 WIPI1Q5MNZ9 446 aaPredicted RBP16.83■□□□□ 0.29
PCDH1-201ENST00000287008 SYT6Q5T7P8 510 aaPredicted RBP16.83■□□□□ 0.29
PCDH1-201ENST00000287008 LAIR1Q6GTX8 287 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 ABI3BPQ7Z7G0 1075 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 LINC01555Q8NAE3 123 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 PSD2Q9BQI7 771 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 S1PR5Q9H228 398 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 KCNG2Q9UJ96 466 aa16.83■□□□□ 0.29
PCDH1-201ENST00000287008 UNC13CQ8NB66 2214 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 ANKUB1A6NFN9 424 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 BOLA2-SMG1P6H3BVE0 249 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 ABCD3P28288 659 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 ALDH3B2P48448 385 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 EMDP50402 254 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 TAS2R30P59541 319 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 TATDN3Q17R31 274 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 RNLSQ5VYX0 342 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 FXYD1O00168 92 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 FAM157BP0CG42 384 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 APEX1P27695 318 aaKnown RBP16.83■□□□□ 0.28
PCDH1-201ENST00000287008 ZNF767PQ75MW2 155 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 LSRQ86X29 649 aaPredicted RBP16.83■□□□□ 0.28
PCDH1-201ENST00000287008 PTOV1Q86YD1 416 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 OR51F2Q8NH61 342 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 ASF1BQ9NVP2 202 aa16.83■□□□□ 0.28
PCDH1-201ENST00000287008 A0A1W2PS29 197 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 SSPNQ14714 243 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 ANKRD16Q6P6B7 361 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 SP7Q8TDD2 431 aaPredicted RBP16.82■□□□□ 0.28
PCDH1-201ENST00000287008 HES7Q9BYE0 225 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 BCKDHBP21953 392 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 HOXD12P35452 270 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 LYPD4Q6UWN0 246 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 ANKRD9Q96BM1 317 aaPredicted RBP16.82■□□□□ 0.28
PCDH1-201ENST00000287008 PRKACAP17612 351 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 NKX2-5P52952 324 aaPredicted RBP16.82■□□□□ 0.28
PCDH1-201ENST00000287008 ZNF468Q5VIY5 522 aaPredicted RBP16.82■□□□□ 0.28
PCDH1-201ENST00000287008 ZNF546Q86UE3 836 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 OR5M9Q8NGP3 310 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 POC1BQ8TC44 478 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 COX14Q96I36 57 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 BANF2Q9H503 90 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 KCNJ16Q9NPI9 418 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 GPR84Q9NQS5 396 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 FBXO4Q9UKT5 387 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 IGHV3-64DA0A0J9YX35 117 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 SOD1P00441 154 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 SERPINA7P05543 415 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 B4GALT1P15291 398 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 ZNF14P17017 642 aaPredicted RBP16.82■□□□□ 0.28
PCDH1-201ENST00000287008 ISL1P61371 349 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 CEACAM16Q2WEN9 425 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 ZNF573Q86YE8 665 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 OR14K1Q8NGZ2 314 aa16.82■□□□□ 0.28
PCDH1-201ENST00000287008 ALKBH3Q96Q83 286 aaPredicted RBP16.82■□□□□ 0.28
PCDH1-201ENST00000287008 ANKRD61A6NGH8 418 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 NKX2-2O95096 273 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 EIF4EP06730 217 aaKnown RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 IGFBP1P08833 259 aaPredicted RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 RPS27P42677 84 aaKnown RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 YBX1P67809 324 aaKnown RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 SH2D5Q6ZV89 423 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 NANOGP1Q8N7R0 232 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 GALNT9Q9HCQ5 603 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 ARID1AO14497 2285 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 NUP214P35658 2090 aaPredicted RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 AGPAT2O15120 278 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 SLC2A10O95528 541 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 PIPP12273 146 aaPredicted RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 HOXA1P49639 335 aaPredicted RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 ZNF547Q8IVP9 402 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 OR6C6A6NF89 314 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 ZAR1LA6NP61 321 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 TOX3O15405 576 aaPredicted RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 INSM1Q01101 510 aaPredicted RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 ZNF793Q6ZN11 406 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 PRSS35Q8N3Z0 413 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 OR1M1Q8NGA1 313 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms