RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TSSK2Q96PF2 358 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 FGF22Q9HCT0 170 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 CYSLTR2Q9NS75 346 aa15.05■□□□□ -0
SH3RF1-201ENST00000284637 CACNA1SQ13698 1873 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 BCL2L11O43521 198 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 TUSC2O75896 110 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 ALOX5APP20292 161 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 BCKDHBP21953 392 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 RNF4P78317 190 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 BAXQ07812 192 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 SCGB2A2Q13296 93 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 HLXQ14774 488 aaPredicted RBP15.04■□□□□ -0
SH3RF1-201ENST00000284637 TMEM52BQ4KMG9 183 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 NKAIN2Q5VXU1 208 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 FJX1Q86VR8 437 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 GABRG1Q8N1C3 465 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 ZNF610Q8N9Z0 462 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 OR1J1Q8NGS3 322 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 UPRTQ96BW1 309 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 SLC6A13Q9NSD5 602 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 C19orf53Q9UNZ5 99 aaPredicted RBP15.04■□□□□ -0
SH3RF1-201ENST00000284637 MYO5AQ9Y4I1 1855 aaKnown RBP15.04■□□□□ -0
SH3RF1-201ENST00000284637 SDHAP31040 664 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 PTGER4P35408 488 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 ARG2P78540 354 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 IFITM2Q01629 132 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 SLC43A2Q8N370 569 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 C9orf62Q8N4C0 152 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 CRYBG1Q9Y4K1 1723 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 PSMB6P28072 239 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 CATR1Q13166 79 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 ARHGAP11BQ3KRB8 267 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 BATF2Q8N1L9 274 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 ZNF808Q8N4W9 903 aaPredicted RBP15.04■□□□□ -0
SH3RF1-201ENST00000284637 WDR89Q96FK6 387 aaPredicted RBP15.04■□□□□ -0
SH3RF1-201ENST00000284637 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 LOC107986453A0A1B0GWG9 222 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 PLSCR5A0PG75 271 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 JTBO76095 146 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 SLC35A1P78382 337 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 OR51A4Q8NGJ6 313 aa15.04■□□□□ -0
SH3RF1-201ENST00000284637 CDCA3Q99618 268 aaPredicted RBP15.04■□□□□ -0
SH3RF1-201ENST00000284637 CHRM2P08172 466 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 RPL27P61353 136 aaKnown RBP15.03■□□□□ -0
SH3RF1-201ENST00000284637 SRPXP78539 464 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 FAM26DQ5JW98 314 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 PRSS35Q8N3Z0 413 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 SMIM4Q8WVI0 70 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 DCBLD2Q96PD2 775 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 NKX3-1Q99801 234 aaPredicted RBP15.03■□□□□ -0
SH3RF1-201ENST00000284637 SEMA6CQ9H3T2 930 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 RAB9BQ9NP90 201 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 PPP5D1E7EU14 171 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 AKR7A3O95154 331 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 SOD1P00441 154 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 PNPP00491 289 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 FGF7P21781 194 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 CSNK1EP49674 416 aaKnown RBP15.03■□□□□ -0
SH3RF1-201ENST00000284637 MMP15P51511 669 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 F2RL1P55085 397 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 OTPQ5XKR4 325 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 MISPQ8IVT2 679 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 LGI3Q8N145 548 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 TP53I13Q8NBR0 393 aaPredicted RBP15.03■□□□□ -0
SH3RF1-201ENST00000284637 RHBDD1Q8TEB9 315 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 MSI2Q96DH6 328 aaKnown RBP15.03■□□□□ -0
SH3RF1-201ENST00000284637 SCMH1Q96GD3 660 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 FGF21Q9NSA1 209 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 IFITM5A6NNB3 132 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 NME2P1O60361 137 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 IL5P05113 134 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 LAP3P28838 519 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 DIO1P49895 249 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 H3F3AP84243 136 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 MIOXQ9UGB7 285 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 FGF17O60258 216 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 IL34Q6ZMJ4 242 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 OR2G3Q8NGZ4 309 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 KIR3DX1Q9H7L2 352 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 PIGLQ9Y2B2 252 aa15.03■□□□□ -0
SH3RF1-201ENST00000284637 CBY3A6NI87 242 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 THBS1P07996 1170 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 DCTDP32321 178 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 NR0B2Q15466 257 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 Q6ZRG5 221 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 SPACA5Q96QH8 159 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 CRLF2Q9HC73 371 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 THAP10Q9P2Z0 257 aaPredicted RBP15.02■□□□□ -0
SH3RF1-201ENST00000284637 GNG12Q9UBI6 72 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 RPH3ALQ9UNE2 315 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 ARRDC5A6NEK1 342 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 RNF212BA8MTL3 300 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 HPNP05981 417 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 PI3P19957 117 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 IRS1P35568 1242 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 RTL10Q7L3V2 364 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 ZNF439Q8NDP4 499 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 BVESQ8NE79 360 aa15.02■□□□□ -0
SH3RF1-201ENST00000284637 DAZAP1Q96EP5 407 aaKnown RBP15.02■□□□□ -0
SH3RF1-201ENST00000284637 LYSMD1Q96S90 227 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms