RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 GPX3P22352 226 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 FCN2Q15485 313 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 PINX1Q96BK5 328 aaKnown RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 OPALINQ96PE5 141 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ELF4Q99607 663 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 CACNA1SQ13698 1873 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 TMED7-TICAM2A0A0A6YYA0 188 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 C1orf105O95561 183 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 CHRM2P08172 466 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 RRASP10301 218 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 TCN2P20062 427 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ERVFC1-1P60608 527 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 GNB2P62879 340 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 SSBP1Q04837 148 aaKnown RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ACOT7LQ6ZUV0 252 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 FAM71CQ8NEG0 241 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 TMED7Q9Y3B3 224 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 M0R143 59 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ELAVL4P26378 380 aaKnown RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 SEMA3BQ13214 749 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 GGTA1PQ4G0N0 100 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF628Q5EBL2 1059 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ZADH2Q8N4Q0 377 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 DTWD2Q8NBA8 298 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 OR52N1Q8NH53 320 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 SLC39A7Q92504 469 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 WRAP73Q9P2S5 460 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 NDRG3Q9UGV2 375 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 OR52A4PA6NMU1 304 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 DCTN6O00399 190 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 TAZQ16635 292 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 SLC5A12Q1EHB4 618 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 NCR3LG1Q68D85 454 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 CHST14Q8NCH0 376 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 DOCK7Q96N67 2140 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 CDCP1Q9H5V8 836 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 NEURL4Q96JN8 1562 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 KIAA1324LA8MWY0 1029 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 SYT5O00445 386 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 DDOSTP39656 456 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 EVX2Q03828 476 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ASAH1Q13510 395 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 LBHQ53QV2 105 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 OR2G6Q5TZ20 316 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 RNASEKQ6P5S7 137 aaKnown RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 OR51S1Q8NGJ8 323 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 HSD3B7Q9H2F3 369 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 MRPS2Q9Y399 296 aaKnown RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 TPOP07202 933 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 OLIG1Q8TAK6 271 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ST8SIA4Q92187 359 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 MED18Q9BUE0 208 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 HES7Q9BYE0 225 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 PARD6AQ9NPB6 346 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 A4GALTQ9NPC4 353 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 TAAR2Q9P1P5 351 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ASH2LQ9UBL3 628 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 AQP9O43315 295 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 CALCBP10092 127 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 FGF7P21781 194 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 GPM6AP51674 278 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 HNRNPA1L2Q32P51 320 aaKnown RBP8.02□□□□□ -1.12
NIPBL-201ENST00000282516 ETFRF1Q6IPR1 90 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 BTNL3Q6UXE8 466 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 EIF4E3Q8N5X7 224 aaKnown RBP8.02□□□□□ -1.12
NIPBL-201ENST00000282516 ST8SIA2Q92186 375 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 ARRDC3Q96B67 414 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 NEURL3Q96EH8 262 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 C12orf57Q99622 126 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 SIAEQ9HAT2 523 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 SLCO1B1Q9Y6L6 691 aa8.02□□□□□ -1.12
NIPBL-201ENST00000282516 H0YGG7 62 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 ALOX5APP20292 161 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 ARR3P36575 388 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 BCL6P41182 706 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 SMAD2Q15796 467 aaKnown RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 RPUSD3Q6P087 351 aaKnown RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 OR10AD1Q8NGE0 317 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 HES4Q9HCC6 221 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 GPR45Q9Y5Y3 372 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 WNK2Q9Y3S1 2297 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 C5orf52A6NGY3 159 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 GATCO43716 136 aaKnown RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 FER1L6-AS2Q96M78 137 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 TRABD2BA6NFA1 517 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 SOD1P00441 154 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 AOAHP28039 575 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 NHLH1Q02575 133 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 NHLH2Q02577 135 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 RTL10Q7L3V2 364 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF687Q8N1G0 1237 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 SLC38A9Q8NBW4 561 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 SORT1Q99523 831 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 P4HTMQ9NXG6 502 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 SLC17A4Q9Y2C5 497 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 MMACHCQ9Y4U1 282 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 A3GALT2U3KPV4 340 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 DDX60Q8IY21 1712 aaKnown RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 COL1A1P02452 1464 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 MTCL1Q9Y4B5 1905 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms