RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 DLX4Q92988 240 aaPredicted RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 HGDQ93099 445 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.92□□□□□ -1.78
CD44-202ENST00000278385 CXorf40BQ96DE9 158 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 CCDC126Q96EE4 140 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 CENPNQ96H22 339 aaPredicted RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 ZNF641Q96N77 438 aaPredicted RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 GFM1Q96RP9 751 aaKnown RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 CGREF1Q99674 301 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 PRRT1Q99946 306 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 MICU1Q9BPX6 476 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 NEURL2Q9BR09 285 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 BEX2Q9BXY8 128 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 ZYG11BQ9C0D3 744 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 NAA50Q9GZZ1 169 aaKnown RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 LINC00597Q9H2U6 94 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 PATZ1Q9HBE1 687 aaKnown RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 APOBEC3GQ9HC16 384 aaKnown RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 SLC25A19Q9HC21 320 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 CISHQ9NSE2 258 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 FBXL3Q9UKT7 428 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.92□□□□□ -1.78
CD44-202ENST00000278385 SCML2Q9UQR0 700 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 COQ4Q9Y3A0 265 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 ZNF337Q9Y3M9 751 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 RAI2Q9Y5P3 530 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 HS3ST3B1Q9Y662 390 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 DENND4AQ7Z401 1863 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 VWA8A3KMH1 1905 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 TRBV5-5A0A0J9YX44 114 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 SLC5A10A0PJK1 596 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 PSMB11A5LHX3 300 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 A8MVM7 634 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 M0R036 132 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 DYNC1I1O14576 645 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 EPHB6O15197 1021 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 KIAA0513O60268 411 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 APODP05090 189 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 UMODP07911 640 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 GNAO1P09471 354 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 M6PRP20645 277 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 ADORA2BP29275 332 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 OPRD1P41143 372 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 MAP3K8P41279 467 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 RBM34P42696 430 aaKnown RBP3.91□□□□□ -1.78
CD44-202ENST00000278385 CRISP1P54107 249 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 SSBP2P81877 361 aaPredicted RBP3.91□□□□□ -1.78
CD44-202ENST00000278385 VLDLRP98155 873 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 PDIA2Q13087 525 aaKnown RBP3.91□□□□□ -1.78
CD44-202ENST00000278385 MAD2L1BPQ15013 274 aaPredicted RBP3.91□□□□□ -1.78
CD44-202ENST00000278385 RBMS2Q15434 407 aaKnown RBP3.91□□□□□ -1.78
CD44-202ENST00000278385 ZNHIT3Q15649 155 aaPredicted RBP3.91□□□□□ -1.78
CD44-202ENST00000278385 C3AR1Q16581 482 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 WASHC2DQ5SRD0 308 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 TIMM23BQ5SRD1 257 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 C10orf25Q5T742 122 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 OR4C11Q6IEV9 310 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 PNCKQ6P2M8 343 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 SLC25A47Q6Q0C1 308 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 Q6ZS52 159 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 CLEC20AQ6ZU45 233 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 PGAP1Q75T13 922 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 COX15Q7KZN9 410 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 SSX6Q7RTT6 188 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 HIPK1Q86Z02 1210 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 ZFP82Q8N141 532 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 MS4A15Q8N5U1 240 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 OR2L5Q8NG80 312 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 FAM222BQ8WU58 562 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 C22orf15Q8WYQ4 148 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 NEIL2Q969S2 332 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 EME1Q96AY2 570 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 S100PBPQ96BU1 408 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 FAF2Q96CS3 445 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 CMTM5Q96DZ9 223 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 ZNF778Q96MU6 729 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 PRAP1Q96NZ9 151 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 CLCC1Q96S66 551 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 LGMNQ99538 433 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 RBBP8Q99708 897 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 KLHDC3Q9BQ90 382 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 TMEM121Q9BTD3 319 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 URM1Q9BTM9 101 aaKnown RBP3.91□□□□□ -1.78
CD44-202ENST00000278385 APOOQ9BUR5 198 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 TRAF4Q9BUZ4 470 aaPredicted RBP3.91□□□□□ -1.78
CD44-202ENST00000278385 BCL2L14Q9BZR8 327 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 CHRNA10Q9GZZ6 450 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 LHX5Q9H2C1 402 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 FZD3Q9NPG1 666 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 SPHK2Q9NRA0 654 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 CUTCQ9NTM9 273 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 FAM49BQ9NUQ9 324 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 TMEM30AQ9NV96 361 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 BABAM2Q9NXR7 383 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 B4GALT7Q9UBV7 327 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 LSM7Q9UK45 103 aaKnown RBP3.91□□□□□ -1.78
CD44-202ENST00000278385 PPP1R3CQ9UQK1 317 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 PDE10AQ9Y233 779 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 MMACHCQ9Y4U1 282 aa3.91□□□□□ -1.78
CD44-202ENST00000278385 MTCL1Q9Y4B5 1905 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms