RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 CD82P27701 267 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 LAP3P28838 519 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 AIMP2Q13155 320 aaKnown RBP13.64□□□□□ -0.23
SF3B4-201ENST00000271628 CAMK2DQ13557 499 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 CEP78Q5JTW2 689 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 STPG1Q5TH74 334 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 ASB18Q6ZVZ8 466 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 CREB3L2Q70SY1 520 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 IL22RA1Q8N6P7 574 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 NOXO1Q8NFA2 376 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 RGP1Q92546 391 aaPredicted RBP13.64□□□□□ -0.23
SF3B4-201ENST00000271628 C4orf45Q96LM5 186 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 FER1L6-AS2Q96M78 137 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 ABHD1Q96SE0 405 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 MRPS18BQ9Y676 258 aaKnown RBP13.64□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF318Q5VUA4 2279 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 IGKV1D-43A0A0B4J1Z2 117 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 ACOD1A6NK06 481 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF814B7Z6K7 855 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 UBL3O95164 117 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 MMP15P51511 669 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 GNG2P59768 71 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 GPR85P60893 370 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 POU4F3Q15319 338 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 DCXRQ7Z4W1 244 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 WDFY1Q8IWB7 410 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 OR14L1PQ8NHC6 308 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 DPAGT1Q9H3H5 408 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 TCF7L1Q9HCS4 588 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 COPZ2Q9P299 210 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 PCSK5Q92824 1860 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 KNTC1P50748 2209 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 FREM3P0C091 2139 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 C7orf66A4D0T2 115 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 TRABD2BA6NFA1 517 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.63□□□□□ -0.23
SF3B4-201ENST00000271628 CDK2AP1O14519 115 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 GPR171O14626 319 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 PIN1P1O15428 100 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 EEF1E1O43324 174 aaKnown RBP13.63□□□□□ -0.23
SF3B4-201ENST00000271628 GALK2Q01415 458 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 SLC25A35Q3KQZ1 300 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 BAIAP2L2Q6UXY1 529 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF767PQ75MW2 155 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF227Q86WZ6 799 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 PRSS35Q8N3Z0 413 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 DEDD2Q8WXF8 326 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 NKD1Q969G9 470 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 MRI1Q9BV20 369 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 RABL2AQ9UBK7 228 aaPredicted RBP13.63□□□□□ -0.23
SF3B4-201ENST00000271628 BOKQ9UMX3 212 aaPredicted RBP13.63□□□□□ -0.23
SF3B4-201ENST00000271628 RABL2BQ9UNT1 228 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 AK6Q9Y3D8 172 aaKnown RBP13.63□□□□□ -0.23
SF3B4-201ENST00000271628 LRP12Q9Y561 859 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 NUBP2Q9Y5Y2 271 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 FREM2Q5SZK8 3169 aa13.63□□□□□ -0.23
SF3B4-201ENST00000271628 CACNA1HO95180 2353 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 A0A0A6YYJ9 748 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 HIST3H3Q16695 136 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 SLC36A2Q495M3 483 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 WDR38Q5JTN6 314 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 OTPQ5XKR4 325 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 OR7E24Q6IFN5 339 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 KRT74Q7RTS7 529 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 CLEC1AQ8NC01 280 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 DEFB124Q8NES8 71 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 ST7LQ8TDW4 575 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 SCMH1Q96GD3 660 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 CMTM3Q96MX0 182 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 UTP23Q9BRU9 249 aaKnown RBP13.62□□□□□ -0.23
SF3B4-201ENST00000271628 ZFP64Q9NPA5 681 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 FTH1P19P0C7X4 201 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 ITGA3P26006 1051 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 BTCP35070 178 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 CD96P40200 585 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 RAC3P60763 192 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 TMPRSS12Q86WS5 348 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.62□□□□□ -0.23
SF3B4-201ENST00000271628 TOMM5Q8N4H5 51 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 C11orf40Q8WZ69 217 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 MCHR2Q969V1 340 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 C7orf50Q9BRJ6 194 aaKnown RBP13.62□□□□□ -0.23
SF3B4-201ENST00000271628 MED28Q9H204 178 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 CYB5R1Q9UHQ9 305 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 SPATA2Q9UM82 520 aa13.62□□□□□ -0.23
SF3B4-201ENST00000271628 DOCK10Q96BY6 2186 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 A0A0J9YW62 118 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 A0A1B0GTH9 108 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 NPIPA2E9PIF3 369 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 NPIPA3F8WFD2 350 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 LINC01387J3KSC0 135 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 RAMP1O60894 148 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 ATF1P18846 271 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 DCTDP32321 178 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 KIR3DL2P43630 455 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 RAG2P55895 527 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 B3GALT5-AS1P59052 145 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 SPINK14Q6IE38 97 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 SLC25A47Q6Q0C1 308 aa13.61□□□□□ -0.23
SF3B4-201ENST00000271628 ESPNLQ6ZVH7 1005 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms