RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 WDR5BQ86VZ2 330 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 ATF6BQ99941 703 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 NTN4Q9HB63 628 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 SIRT3Q9NTG7 399 aaPredicted RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 DNAJB12Q9NXW2 375 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 TPRP12270 2363 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 RGPD3A6NKT7 1758 aaPredicted RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 JUNBP17275 347 aaPredicted RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 RPS19P39019 145 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 ZNF616Q08AN1 781 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 HACD4Q5VWC8 232 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 ANKRD16Q6P6B7 361 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 LYPD4Q6UWN0 246 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 SPAG16Q8N0X2 631 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 SLC22A18ASQ8N1D0 253 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 CD300LFQ8TDQ1 290 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 DCUN1D4Q92564 292 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 BANF2Q9H503 90 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 ZNF768Q9H5H4 540 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 TCFL5Q9UL49 500 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 B9D1Q9UPM9 204 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 ATP23Q9Y6H3 246 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 LOC100289279A0A1B0GTE1 492 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 HOXB5P09067 269 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 HNRNPFP52597 415 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 CEACAM16Q2WEN9 425 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 SLC22A25Q6T423 547 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 PRSS42Q7Z5A4 293 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 C12orf45Q8N5I9 185 aaPredicted RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 TAAR8Q969N4 342 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 OCSTAMPQ9BR26 566 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 GPR84Q9NQS5 396 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 A0A1B0GV50 99 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 M0R1B8 84 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 DPM1O60762 260 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 SCGB2A1O75556 95 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 PAHP00439 452 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 RPS23P62266 143 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 SLC9A3R2Q15599 337 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 INTS12Q96CB8 462 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 HYLS1Q96M11 299 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 PPIL3Q9H2H8 161 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 RNF167Q9H6Y7 350 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 MMP25Q9NPA2 562 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 UBQLN2Q9UHD9 624 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 ZNF780AO75290 641 aaPredicted RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 UBL3O95164 117 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 HLA-AP01891 365 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 OR8U9P0C7N5 309 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 CD53P19397 219 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 ALDH3B2P48448 385 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 PMPCAQ10713 525 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 EDDM3AQ14507 147 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 EBPQ15125 230 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 OR8G1Q15617 311 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 FBXW12Q6X9E4 464 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 EMG1Q92979 244 aaKnown RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 ANKRD9Q96BM1 317 aaPredicted RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 CDCA4Q9BXL8 241 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 FAM117AQ9C073 453 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 RAB22AQ9UL26 194 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 SLC22A13Q9Y226 551 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 LRRC30A6NM36 301 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 ALG1L2C9J202 215 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 SDHBP21912 280 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 B3GNTL1Q67FW5 361 aaPredicted RBP12.4□□□□□ -0.42
NPC1-201ENST00000269228 IDO2Q6ZQW0 420 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 SECTM1Q8WVN6 248 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 SIGLEC11Q96RL6 698 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 DUSP21Q9H596 190 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 ZFP64Q9NPA5 681 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 TAS2R3Q9NYW6 316 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 CHST2Q9Y4C5 530 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 APEHP13798 732 aaKnown RBP12.4□□□□□ -0.42
NPC1-201ENST00000269228 CDAP32320 146 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 STARD6P59095 220 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 AGAP6Q5VW22 663 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 CBLN3Q6UW01 205 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 TP53TG5Q9Y2B4 290 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 SCN3AQ9NY46 2000 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 PEBP1P30086 187 aaKnown RBP12.4□□□□□ -0.42
NPC1-201ENST00000269228 BRCA1P38398 1863 aaKnown RBP12.4□□□□□ -0.42
NPC1-201ENST00000269228 RBP2P50120 134 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 SHBQ15464 509 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 TSC22D1Q15714 1073 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 RTL8AQ9BWD3 113 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 EGLN1Q9GZT9 426 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 C20orf141Q9NUB4 165 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 ETV7Q9Y603 341 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 MYOFQ9NZM1 2061 aa12.4□□□□□ -0.42
NPC1-201ENST00000269228 MEIOCA2RUB1 952 aa12.4□□□□□ -0.43
NPC1-201ENST00000269228 WDR88Q6ZMY6 472 aa12.4□□□□□ -0.43
NPC1-201ENST00000269228 OR13C5Q8NGS8 318 aa12.4□□□□□ -0.43
NPC1-201ENST00000269228 SPACA5Q96QH8 159 aa12.4□□□□□ -0.43
NPC1-201ENST00000269228 USB1Q9BQ65 265 aaKnown RBP12.4□□□□□ -0.43
NPC1-201ENST00000269228 LILRB5O75023 590 aa12.39□□□□□ -0.43
NPC1-201ENST00000269228 UBBP0CG47 229 aa12.39□□□□□ -0.43
NPC1-201ENST00000269228 MRM1Q6IN84 353 aaKnown RBP12.39□□□□□ -0.43
NPC1-201ENST00000269228 OR1M1Q8NGA1 313 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms